KEGG   Panicum virgatum (switchgrass): 120712687
Entry
120712687         CDS       T07260                                 
Name
(RefSeq) brassinosteroid-responsive RING protein 1-like
  KO
K16281  RING-H2 zinc finger protein RHA1
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvir04121]
    120712687
Ubiquitin system [BR:pvir04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    120712687
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-ANAPC11 zf-RING_UBOX zf-RING_5 zf-RING_16 zf-C3HC4_3 zf-RING_4 Prok-RING_4 RINGv zf-C3HC4_5 PHD_NSD Prok-RING_1 zf-C3HC4_4 zf-RING-like DUF1272 zf-Nse
Other DBs
NCBI-GeneID: 120712687
NCBI-ProteinID: XP_039854466
LinkDB
Position
1K:complement(46326187..46327336)
AA seq 159 aa
MVSYALAVPKPVVAFCQLLGVIRDAFLLMLAVVGLWPVPHGDGSRGPAAVPKPAEVKARL
PAVAYGELVAERLLSSPPPVASPGGEEEAAAAPTCIVCLENVEAGHEVRRLGNCAHAFHR
GCIDRWIDQGRATCPLCRSDLLPRPRARARLASLLTRVW
NT seq 480 nt   +upstreamnt  +downstreamnt
atggtgagctacgccctcgccgtgcccaagccggtcgtcgccttctgccagctgctcggc
gtcatcagggacgccttcctgctgatgctagccgtcgtggggctctggcccgtcccgcac
ggtgacggatcgcgcggccccgcggccgtgcccaagcccgcggaggtgaaggcccggctc
cccgccgtggcgtacggcgagctcgtggccgagcggttgctgtcgtcgccgccaccggtg
gcgtccccgggcggcgaggaggaggccgcggcggcgccgacgtgcatcgtgtgcctggag
aatgtggaggcggggcacgaggtgcggcggctgggcaactgcgcgcacgccttccaccgc
ggctgcatcgaccggtggatcgaccagggccgggcgacgtgcccgctgtgccggtccgat
ctgctgccgcgcccgcgggcccgggcccggctggccagcctcctcacgcgcgtttggtga

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