Panicum virgatum (switchgrass): 120712694
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Entry
120712694 CDS
T07260
Name
(RefSeq) LOW QUALITY PROTEIN: RNA cytosine-C(5)-methyltransferase NSUN2-like
KO
K15334
multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:
2.1.1.202
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120712694
Enzymes [BR:
pvir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.202 multisite-specific tRNA:(cytosine-C5)-methyltransferase
120712694
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
120712694
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Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Pre-PUA_NSUN2
PUA_NSUN2
FtsJ
Motif
Other DBs
NCBI-GeneID:
120712694
NCBI-ProteinID:
XP_039854482
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Position
6K:complement(41045253..41052215)
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AA seq
802 aa
AA seq
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MLASRTTVSLRHRIVAGGPRRRCVGRSERKPQGRHFTQALKSLWRHSPPDPPLPAAAATG
GDAKSSWQSPVLENAAFEEYYKVQQIVLKEEWDAFMSVLRKPLPATFRINACCQFYKDIC
SKLKNDFRRYLESEVSSENGEDAIRPLPWYPGNLAWHLNFSRKELRKNRALESFHEFLKH
ESEVGNITRQEAVSMVPPLFLNVQPDHHILDMCASPGSKTFQLLEMIHQSKEPGLLPGAL
VMANDLYVQRCDLLIHNTKRMCTANLIVTNHEAQNFPDCSLANDYSEAYKDTCKPQGLEF
DRILCDVPCSGDGTIRKGHEMWRKWNSGMGNQLHLLQVNIAMHGIALLKVGGRMVYSTCS
MNPVENEAVVAELLRRSGNSVELLDVSSELPELVRRPGLSTWKVQDRGSLFQTHDDVPHD
RKNVVLPSMFPSSNGTEETHTVRGDVEVNIDDRSSLKNCNIEETRKINHDTDGLSINSNK
KLDCTSNILNSKFPLHRCMRIVPHDQNSGAFFIAVLHKLSPLNGCQIQGTKIQHPPAKGI
TVQPQKEPEPETRLYETILTHQQNNVSKVVDSAEVLESSRAESGDRMKLQKQSRWKGVDP
VLFFKDEVVIKSIISFFGIKESFPLQGHLVTRSTDNARRIYYVSKSVKKILELNAEVGEQ
LKIVSLGIKMFESHRSKDCCSCAYRLSYEGLSLLLPYVSKRILYASPLDFHRLLQYRSIN
FAHFVDARFGEEAASLMPGCCVVVLLEGHKHVDSICKDPSTIAIVCWRGKGTMNVMVSPP
DRKDLLERMAYRFGLKACAEED
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgttagcctcgaggaccaccgtctcgctccgccaccgcatcgtcgccggcggcccgcgg
aggcgatgtgtcgggcgaagcgaaaggaaaccgcagggccgccacttcacgcaggccctc
aagagcctctggaggcacagccccccggatcctcctcttccagccgccgccgctactggc
ggtgatgccaaatcctcgtggcaatcaccagtactcgagaacgctgccttcgaggagtac
tataaggttcagcaaattgtcctcaaggaggagtgggatgccttcatgagtgtcctacgg
aaaccattacctgcgactttcaggatcaacgcctgttgccagttttataaagatatctgc
tcaaagttgaaaaatgattttaggcgatatttggagagtgaggttagtagtgagaatgga
gaagatgctatcaggcccctgccttggtatccaggcaatcttgcatggcacctgaatttc
tctcggaaggaactgaggaaaaatcgggcacttgagagttttcatgagtttctaaagcat
gagagtgaggttggtaacataactaggcaagaggctgttagcatggttccaccattgttt
ctgaatgtacaacctgatcaccatattcttgatatgtgtgcttctccaggctctaaaact
ttccagttactcgagatgattcaccaatcaaaagaaccaggactacttccaggggcattg
gtgatggccaacgatctctatgtgcaaagatgcgatctccttatccataatacaaagaga
atgtgcactgccaacctaatagtaacaaaccatgaagcacaaaacttccctgattgttct
cttgcaaatgattattcagaagcttataaggatacctgcaagccacaaggtttagaattc
gatcgtatactttgtgatgttccctgcagtggtgatgggactattcgcaagggtcatgaa
atgtggagaaagtggaactcaggcatggggaaccaacttcatcttctgcaagtgaatatt
gctatgcatggtattgcgttacttaaagtgggtggaaggatggtctattctacatgttca
atgaatcctgttgaaaatgaagctgttgtagcagagctccttcgaagaagtggaaactct
gttgaactccttgatgtttctagtgagctgcctgaattggtccggcgtcctgggcttagc
acttggaaggtacaagatcgaggatctttgtttcagactcatgatgatgttccacatgat
aggaagaatgtagtattgccgagcatgtttccttcaagtaatggcactgaggaaacccat
actgtgcgtggtgatgttgaagtgaatatagatgataggagcagcttaaaaaattgcaac
attgaagaaacaagaaaaattaatcatgatacggatggactttctatcaattccaataaa
aaattggattgtacttctaacatactgaattcaaaattcccactgcatcggtgcatgagg
attgttcctcatgaccaaaacagtggggcatttttcatcgcagttcttcataaattgtct
cccttgaatggctgtcagatacagggcactaaaattcagcacccacctgcaaaaggcata
accgtgcaacctcagaaagaacctgagccagaaacaagactatatgaaactattttgaca
caccaacagaacaatgtttctaaagttgttgattctgctgaagtgctggaaagcagtcga
gcagaatcaggcgacagaatgaagctgcaaaaacaaagcaggtggaaaggggtcgatcct
gtattatttttcaaagatgaagtggtgataaagagcataatatccttctttggcatcaag
gaatcattcccactccaaggtcatctggtgactagaagcactgataatgcaaggagaata
tattacgtatcaaaatcggttaaaaagattttggagctgaatgcagaagttggtgagcag
cttaagatcgtttcgcttggtataaagatgtttgaaagtcatagatcgaaggattgctgt
tcatgtgcatatagattgtcctacgagggcttatcactactgcttccatatgtcagcaag
cggatactatatgcatctccactggacttccaccgacttttacagtacagaagtatcaac
tttgctcattttgttgatgccagatttggggaggaagctgcatccttgatgcccggttgc
tgtgttgtagtgttacttgaagggcataagcatgttgattctatttgtaaggatccctcc
acaattgcaattgtttgctggagagggaaggggactatgaatgtcatggtttctcctcca
gataggaaggatctgcttgaacggatggcatatcgcttcggtcttaaagcctgtgcggag
gaagattag
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