Panicum virgatum (switchgrass): 120712900
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Entry
120712900 CDS
T07260
Name
(RefSeq) BOI-related E3 ubiquitin-protein ligase 1-like
KO
K19042
E3 ubiquitin-protein ligase BOI and related proteins [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120712900
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120712900
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120712900
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
Prok-RING_4
zf-RING_2
FakA-like_C
zf-C3HC4
PhoU
Motif
Other DBs
NCBI-GeneID:
120712900
NCBI-ProteinID:
XP_039854764
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All DBs
Position
1K:complement(46611684..46613588)
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AA seq
346 aa
AA seq
DB search
MAVQAQYPSNLLFHDRGEPERKEMDMPRPPQLAVVSPAAVYFSSGGASGNRRKRPREPMA
PPPPPAAKEEYVNLFTLQPQQSTSFANMARFQSQNRVSSSPSPAATALVSTGLRLAFDEQ
QQQQQKQESKQMMNALSHSASQSLFASVSDELAAQVKQHDDEIDRFIREQGEQLRRAMAD
RLRRHNRAILVKADQSAARRLREKAAEAEREARRGAELEERLVRLRGEAAAWQARALSEQ
AAAVTLHAQLQQAAAAARASVEELAAAGDAGPAESSSSAYVDPRRAGPSSDRACLGCRLR
PASVVLLPCRHLSLCGECFAAGDADAAMACPVCLCVRTGSVEAILC
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggcagtacaggcgcagtacccgtccaatctcctcttccacgacagaggcgagccggag
aggaaggagatggacatgcccaggccgccgcagctcgccgtagtctcgccggcggcagtc
tacttctccagcggcggagcgagtgggaatcggaggaagcggcccagggagcccatggcg
ccgccgccgccgccggcggccaaggaggagtacgtcaatctgttcacactccagccgcag
cagtcgacgtcgtttgcgaacatggcgcgcttccagagccagaacagggtctcgtcgtcc
ccgtcccccgccgcgaccgcgctcgtgtcgactggcctccgcctcgcattcgacgagcag
cagcaacaacaacaaaaacaggagagcaagcagatgatgaatgccctgagccactcggcg
tcgcaatcgctgttcgcctccgtctccgacgagcttgccgcgcaagtgaagcagcatgat
gacgagatcgaccggttcatccgggaacagggcgagcagctcaggcgggcgatggccgat
cggctgcggcgccacaaccgggcgattctggtcaaggcggaccagtccgccgcgcgccgg
ctccgggagaaggcggcggaagcggagcgcgaggcgcggcgcggcgccgagctggaggag
cggctcgtccgcctccgtggcgaggcggcggcgtggcaggcgagggcgctgtcggagcag
gccgccgcggtcaccctgcacgctcagctgcagcaggccgcggccgcggcgcgcgcgtcg
gtcgaggagctcgccgccgcgggcgacgcgggccccgcggagtcctcgtcgtcggcgtac
gtggacccccgccgcgccgggccgtcgtcggaccgtgcgtgcctcggctgccgcctcagg
ccggcctccgtggtgctcctcccctgcaggcacctctccctgtgcggcgagtgcttcgcc
gccggcgacgcggacgccgccatggcgtgcccggtgtgcctgtgcgtgcggacggggagc
gtggaggccatcctctgttga
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