Panicum virgatum (switchgrass): 120712951
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Entry
120712951 CDS
T07260
Name
(RefSeq) proteasome subunit beta type-1-like
KO
K02732
20S proteasome subunit beta 6 [EC:
3.4.25.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
120712951
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120712951
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pvir03051
]
120712951
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
120712951
Peptidases and inhibitors [BR:
pvir01002
]
Threonine peptidases
Family T1: proteasome family
120712951
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
beta type subunits
120712951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
SbmA_BacA
PmbA_TldD_2nd
Motif
Other DBs
NCBI-GeneID:
120712951
NCBI-ProteinID:
XP_039854826
LinkDB
All DBs
Position
6K:44906573..44909111
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AA seq
219 aa
AA seq
DB search
MARFDPYENNGGTCVAVAGADYCVVAADTRLSVGYSILSRDHSKVAQLADKCVLASFGFQ
GDIKALQKNLAAKELVYEHNHNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSQGK
GCVFTYDAVGSYERTGYSAQGTGAALMMPVLDNQLKSPSPLLLPARDAVTPLSQSEAVDL
VKDVFASATERDIYTGDRLEIVVINSSGTYREYIELRKD
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggccaggttcgacccgtacgagaacaacggcggcacctgcgtggccgtcgccggcgcc
gactactgcgtggtcgccgccgacacccgcctctccgtcggatacagcatcttgtcccgc
gaccactccaaggtcgcccaactggcagacaaatgtgttttggcctcatttggcttccaa
ggtgatatcaaagctttgcagaagaatctggcagccaaggaattggtttatgagcacaat
cataacaagaagatgagctgccctgcaatggcgcaactgctgtcgaacacactctactac
aagagattcttcccatactacgcattcaatgtattgggtggactggacagccaaggtaaa
ggatgtgtctttacatacgatgctgttgggtcttatgagaggacaggttatagtgctcag
ggaacgggtgcagcattgatgatgcctgttcttgacaatcagttgaaatcccctagtcct
ctactactgccagctagggatgcagtgacgcccttatctcaatctgaggcagttgatctg
gtgaaggacgttttcgcatcagctacagaacgagacatatacactggagatagattggaa
attgtggtcatcaacagctccggcacataccgagagtacattgaacttaggaaggactag
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