Panicum virgatum (switchgrass): 120712987
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Entry
120712987 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120712987 isoform X1
KO
K08507
unconventional SNARE in the endoplasmic reticulum protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120712987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120712987
Membrane trafficking [BR:
pvir04131
]
SNARE
SNAP-25[C] (Qc)
Use1
120712987
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Use1
BORCS6
Senescence
Glutaminase
Sec20
MASE10
OTT_1508_deam
Motif
Other DBs
NCBI-GeneID:
120712987
NCBI-ProteinID:
XP_039854880
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All DBs
Position
6K:45223244..45226370
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AA seq
240 aa
AA seq
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MRLNKVEVNLRRLLEAAPRQQNQAKLVHYVTTARELLEQLGAETTPEGISSVSKAKLSEY
SEKIEALAARLAAPVLVQPENEKPVVESREEEISDEKAKAESPISLSSGLRRRSAAHVEV
RPSHQEQKGDIGAPIKLDAAAQAHIEKHRKLQEDLTDEMVELARQLKESSLMMNQSVQQT
EKILDSTERAVEHSLASTGRATSRAAEVYSLTSKTTCFQCLLLFVMTCMFVMVVLLIRIT
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcaacaaggtggaagtgaacctcagaaggctgctggaggcggctcctcggcag
cagaatcaggctaagcttgttcattatgtaaccacagccagggagctattggagcagcta
ggggcagagaccacacctgaagggatatcaagtgtttctaaagctaagctttctgagtat
tcagaaaagattgaagcactagctgccaggcttgctgctccagtgttggtgcagcctgaa
aatgaaaagccagttgttgaaagcagagaagaagagatctctgatgaaaaagctaaggcg
gaaagcccaatatctttatcatcaggattgcgaaggagatcagcggctcatgttgaggtt
cggccaagccatcaggagcaaaaaggtgatattggggcacctatcaaattggatgcagca
gctcaggctcacattgagaagcacaggaagctgcaagaagatttaactgatgaaatggtc
gagttagcacgccagctgaaggaaagtagccttatgatgaaccaatctgtgcaacagacg
gagaagatccttgattccactgagagggccgtggagcatagcttggcaagcaccggtcgc
gcaacctcgcgagcagcggaggtctactcgctgacttccaagacaacgtgcttccagtgt
ctgctcctctttgtgatgacctgcatgtttgtaatggtggttctgctcatacggatcact
tga
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