Panicum virgatum (switchgrass): 120713021
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Entry
120713021 CDS
T07260
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD3-like
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120713021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120713021
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120713021
Membrane trafficking [BR:
pvir04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
120713021
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
120713021
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120713021
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank_2
Ank
PH
BAR
Ank_3
Ank_4
Ank_5
PH_8
PH_11
ANK_LRRK2
PH_20
BAR_2
PH_13
AAA_23
Motif
Other DBs
NCBI-GeneID:
120713021
NCBI-ProteinID:
XP_039854913
LinkDB
All DBs
Position
6K:complement(45829545..45840416)
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AA seq
831 aa
AA seq
DB search
MYFAKLDDSPMFRTQIQSLEESAELLRERCLKFHKGCRKYTEGLGEAYDGDIAFASSLEI
FGGGHNDPISVAFGGPVMNKFTIALREIGTYKEVLRSQVEHMLNDRLLNFVDIDLHDVKD
AHKRFDKASLAYDQIRDKYLSLKKGTRPDITTAIEDELHSARSSFEQARFNLVTSLSHIE
SKKRFEFLEAVSATMDSHLRYFKQGYELLHQMEPYINQVLAYAQQSRERANKEQASLVER
MHEYKRQIDRESRSTVNGLSDCYNGDGIQTIGRSSHKMIEAVMQTASKGKVQTIRQGYLS
KRSSNLRADWKRRFFVLDSRGMLYYYRKQITRPPGGCSIQRGVNPPEHGSGLLSRLFSSH
YHGIIHDDKSVARHTVNLLTSTIKVDAEQSDLRFCFRIISPTKVYTLQAESAVDQMDWIE
KITGVIASLLTSQSPEQFLLSSPKGSGHDRSTSESSSFTSSVEFETATIDDLILEKYSAN
GQHDVRGTHHHRTNVKPDKPIDLLRKVDGNNICADCGASEPDWASLNLGALLCIECSGVH
RNLGVHISKVRSLTLDVRVWEPSVINLFQSLGNMFVNNIWEEMLPSSNNGRPDDNLSADG
SDSSQYLSVRKPKHKDAFSAKEKFIHAKYVDKEFIRNHSMDESHLAQQMWNSVAANDKKA
AYSLIVRSRANVNFVWGDMPSSSCLTLGKALQLEQTALTPDGSPRFFDCNSHDKISPREP
LSPASTSSRTDDMEDSCEGFSLLHLACRVADVGMVELLLQYGSSVNMTDSKGRTPLHHCI
LKGRHQHAKLLLSRGADSQAMDRDGRTALQYAIDGGTSDEDILILLEDHSR
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcgccaagctcgatgactcgcccatgttccggacgcagatacagtcacttgag
gagagtgctgaattgctgagagagagatgtttgaaattccataaaggttgccgcaagtat
actgaaggactaggggaagcatatgatggagatattgcatttgcaagctcacttgaaata
tttggaggaggccacaatgatccaattagtgttgcttttggtggacctgtcatgaacaaa
tttacaattgccttgagagaaattgggacatacaaggaagttctgcgctcccaggttgag
cacatgctgaatgacagattgctgaattttgtggatattgatttgcatgatgtgaaggat
gctcataagcgttttgacaaggctagccttgcatatgaccagattcgtgacaagtaccta
tcattgaagaaaggcacaaggccggacataacaactgcgatcgaggatgagctccacagt
gctagatcttcatttgagcaggctcgtttcaacctggtcacgtcgctttcccacatcgaa
tcaaagaagagatttgaatttttggaggctgttagtgcgacgatggactcacatcttcga
tatttcaaacaaggatatgaattattgcatcaaatggagccatatattaatcaggttctt
gcttatgctcagcaatcaagagaaagggcaaacaaggaacaagcttctcttgtagagagg
atgcatgagtacaaaaggcagatagaccgggaaagtcggtctactgtaaatggtttgagt
gattgttacaatggtgatggaatacagacaattggtagaagttcacataaaatgattgaa
gcagtgatgcaaacagcctcaaaaggcaaggttcagaccattcgtcaaggttacctttca
aagagatcatcaaacttgagagctgactggaaaagaaggttcttcgtacttgatagtcga
ggaatgttgtactactatcgcaaacaaattactaggccacctggtggttgttccatccaa
agaggcgttaacccccctgaacatggttctgggttgttgagcagattgttctcttctcat
taccatggtattatacatgatgataagtctgttgcacggcatactgtaaatttgttgaca
tcaaccattaaggttgatgcagagcaatcagatctgaggttctgcttcagaattatttca
cccacaaaggtctacacactgcaggcagagagtgcagtagatcagatggattggattgaa
aaaataactggtgttattgcctccctgctgacctcacaatccccagaacagtttttgttg
tcaagccctaagggcagtggccatgacaggagtaccagtgagagtagctcctttactagt
tcagtggaatttgaaacagccacaatcgatgatttaatactggagaagtattctgcaaat
gggcagcatgatgttagaggcacacatcatcacagaaccaacgtgaaacctgacaaacca
attgacttgcttaggaaagtcgatggcaacaatatatgtgctgactgtggtgcttcagaa
cctgattgggcatctctaaaccttggcgcccttctgtgcatagagtgttctggggtgcac
agaaatcttggagtgcatatatcaaaggtaagatctctgacacttgatgtcagagtttgg
gagccatctgtaatcaatctctttcagtcattaggcaacatgtttgtcaataatatttgg
gaagagatgttaccttcatcgaataatggccgtcctgatgataatttaagtgctgatgga
tcggactcatcacaatacctctctgttagaaagcctaaacacaaagatgctttctctgcc
aaagagaagtttattcatgccaagtatgtagacaaagaattcatacggaaccatagcatg
gatgagagtcacctagctcagcagatgtggaatagtgtagctgcgaatgacaagaaagct
gcatacagtctcattgtgagatcacgtgcgaacgtaaattttgtttggggagatatgcct
tctagttcatgtttgactcttggaaaagcacttcagctagagcaaacagctttgacacct
gatggaagtcctagatttttcgattgcaattctcatgacaagatttctccaagagagccc
ctttcccctgctagcacaagttcacgcacagatgacatggaggacagttgtgaaggtttc
tccttgcttcatcttgcatgccgtgtcgcagatgttgggatggttgaattactgctgcag
tatggctctagtgtaaatatgactgattcaaagggtcggacaccccttcatcactgcatt
ttgaaaggaagacatcagcatgccaagcttctcctctccagaggggccgattcacaagcc
atggatcgagatggtagaacagcattacagtatgcaattgatggtggaacaagcgatgaa
gatattcttattttgttagaggaccatagtagataa
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