Panicum virgatum (switchgrass): 120713025
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Entry
120713025 CDS
T07260
Name
(RefSeq) glycine--tRNA ligase, mitochondrial 1-like
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120713025
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvir01007
]
120713025
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120713025
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120713025
Enzymes [BR:
pvir01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
120713025
Amino acid related enzymes [BR:
pvir01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
120713025
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120713025
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
120713025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
FliG_C
Motif
Other DBs
NCBI-GeneID:
120713025
NCBI-ProteinID:
XP_039854916
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All DBs
Position
6K:45875153..45879345
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AA seq
692 aa
AA seq
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MAATSEDALRRALAEHQAAVDAQAEAVRALKAGGGASKADVDAAVEALKALKVEAGAAAR
RLQQAVGAGAGGAAREELRQAVVNTLERKLFYIPSFKIYRGVAGLYDYGPPGCRVKANVL
SFWRQHFVLEENMLEVDCPCVTPEIVLKASGHVEKFTDLMVKDEKTGTCYRADHLLKDFC
KEKLEKDLTLPQEKADEFKRVLAILDDLSAEELGAKIKEYGIIAPDTKNPLSDPYPFNLM
FQTSIGPTGLSVGYMRPETAQGIFVNFKDLYYYNGQKLPFAAAQIGQAFRNEISPRQGLL
RVREFTLAEIEHFVDPEDKSHPKFVDVADLEFLMFPRELQLSGESAKLMKLGDAVSKGTV
NNETLGYFIGRVYLFLTRLGIDKGQLRFRQHLPNEMAHYAADCWDAEIECSYGWIECVGI
ADRSAYDLRAHSEKSGVPLVAHEKFSKPREVEKLVIVPSKKDLGLAFKGNQKMVVEALEA
MSEKEALEMKSALETKGETSFKVCTLGKDVVITKKMVSIGMEKKLEHQRVFTPSVIEPSF
GIGRIIYCLFEHSFYTRPSKSEEEQLNVFRFPPLVAPIKCTVFPLVKNQEFDAAAKVIAK
ALTTAGISHIIDTTAISIGRRYARTDEIGVPFAVTVDSTTNVTIRERDSKEQIRVDITEV
ASVVKQLTEGQSTWADVSAKYPAHVGPQGDQE
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgacgtcggaggacgcgctgcggcgcgcgctcgccgagcaccaggccgccgtg
gacgcgcaggccgaggccgtgcgcgcgctcaaggccggcggcggcgcgtccaaggccgac
gtggacgcggcggtcgaggcgctgaaggcgctcaaggtcgaggccggcgccgccgcgcgc
cggctgcagcaggccgtcggggcgggcgcgggcggcgccgcgagggaggagctgcggcag
gccgtggtgaacaccctggagcggaagctgttctacataccctcgttcaagatctaccgc
ggggtggcggggctttacgactacgggccgcctgggtgccgcgtcaaggcaaatgttctt
tccttctggcgccagcactttgttctggaagagaacatgttggaggttgactgcccctgt
gtcacacctgaaatcgtcctgaaggcatctggccatgttgagaagtttactgacctcatg
gttaaagatgagaagacaggcacatgctaccgtgctgatcacttgttgaaagatttttgc
aaggaaaagcttgagaaagaccttaccttgccccaagagaaggctgatgaatttaagcgt
gttcttgccatcttggatgacctctcagcagaggagcttggtgcaaagattaaggaatat
ggcatcattgcccctgatacaaagaacccgctttctgatccctacccattcaatcttatg
ttccagacatctattgggcccactggtcttagcgtggggtatatgcgacctgagactgca
cagggcatttttgtaaacttcaaggacctgtactactacaatggacaaaagcttcccttt
gcagcagcccaaattgggcaggcttttagaaatgagatctcgccacgacaaggtcttctc
cgagtgcgtgaattcacattggcagagattgagcattttgtggatccagaggataaatca
catccaaagtttgttgatgttgctgatttggagttcttgatgtttccaagagagctgcaa
ctctcaggggagtcagccaagttaatgaagcttggtgacgcagtttcaaagggaactgtt
aataacgagacacttggttacttcattggaagggtctatcttttcctgacacgcttggga
attgataagggtcagctgcgcttcaggcagcatctacctaatgagatggcccattatgct
gctgattgttgggatgctgaaatagagtgctcttatgggtggatagagtgcgtcggtatt
gctgatagatcggcatatgatttgcgagcacactctgagaaaagtggtgtcccacttgtt
gcacatgaaaagttttccaagcctagggaggttgagaaacttgtgatagttccctcaaag
aaagacctggggcttgcttttaaggggaaccaaaagatggtcgttgaagcattggaggct
atgagtgagaaggaagctttagagatgaaatctgctctagaaaccaagggggagacaagc
tttaaagtctgcacacttggaaaagatgtggtgattaccaagaaaatggtgtcaatcggc
atggagaagaagctggaacatcagcgagtcttcaccccttcggtcattgaaccatcattt
ggcataggcaggatcatctactgtttgttcgagcattcgttttacacaaggcctagcaaa
tcagaagaggaacagcttaatgtcttccggttccctcctctagtggctcctattaagtgc
actgtgttccccctggtgaagaaccaagagtttgatgctgctgccaaagtgattgctaaa
gcattaacaactgctggtatatcccacattattgacactactgctatatccattgggagg
aggtatgcaaggacagatgagattggtgttccatttgctgtaacagttgattccacaaca
aacgtgactatccgggagagggacagtaaggaacagatccgggtggacatcaccgaagtg
gcatccgtggtgaagcaactgacagaaggccaaagcacctgggccgatgtttctgcaaag
tatcctgcccatgttggcccccaaggtgaccaggagtaa
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