Panicum virgatum (switchgrass): 120713028
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Entry
120713028 CDS
T07260
Name
(RefSeq) retinoblastoma-related protein 3 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120713028
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
120713028
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
Motif
Other DBs
NCBI-GeneID:
120713028
NCBI-ProteinID:
XP_039854919
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All DBs
Position
6K:complement(45916111..45922607)
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AA seq
1039 aa
AA seq
DB search
MEGAAKPSTSSGSGVTDGASGGAGAAAGASMEEGFTDLCKACSPHPADLFYPLGVGSLSE
ETMQCKSKLGLDESTTRQAMQLFKETKNILKSSMSSLGGGSPEEIERFWYACVLYCVSRL
SKAGRSKEDGGVSLCQILRASKLNIVDFFKEMPQFCIKVAHILTGLYGSDWEKKLELKEL
QANIVHLSLLSRYYKRAYQELFLSNDAKYSENSSESSNQEASDYYRFGWLLFLVLRIQSF
SRFKDLVTSTNELVSVLAVLIIHVPVRLRSFNVKDSPYFGKKSDQGVNLIASLCEKYHTS
EDELSKALEKTNTLIMDILKNKPCSASECQQDSLSFIDPEGLKVFKDLLQGNSLKSSLLI
LEKEYDNAINSKGELDERMFANDEDSLLGSGSLSGGAVNLPGTKRKYDVMASPAKSITSP
SPMSPPRFCLSPKGNSFGSSKMAPITPVSTAMTTAKWLRTTITPLPSKPSGELLRFFSAC
DKDLTEDITHRAGIILGAIFTSSSFGERICTNVRSANRMDAIWTEQRKMEALKLYYRVLE
SMCRAESQILSGSGNNLTSLLSNERFHRCMIACSAELVLATHKTVTMMFPAVLEKTGITA
FDLSKVIEGFVRHEDTLPRELKRHLNSLEERLLESMAWQKGSSMYNSLIVARPALSAEIN
RLGLLAEPMPSLDAIAAHHNISLGGLPPLPFQKQEHSPDKDEVRSPKRACTERRNVLVDN
NSFRSPVKDIIKSKLPPLQSAFASPTRPNPAAGGETCAETGIGVFFSKITKLAAIRIRSL
CERLQLSQQVLERVYFLIQQILSQQTALFFNRHIDQIILCSIYGVAKISQLELSFKEIIF
GYRKQPQCKPQVFRSVYVHWPPRCRNGKTGEDHVDIITFYNEVFIPAAKPLLVEVGPGAS
PNKKEEEKGSVDVGPFPESPRLARFPNLPDMSPKKVSATHNVYVSPLRSSKMDILLSPSS
KSYYACVGESTYAFQSPSKDLKAINNRLNSGKKVSGRLNFDIVSDLDVASSLSSDQNAKP
AAMEVVPVKTPVKCEPSDS
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggagggagcagcgaagccgtcgacgagctcggggtcgggggtcacggacggggcctcg
ggcggcgccggcgccgccgcgggcgcctccatggaggaggggttcaccgatctgtgcaag
gcgtgctccccccaccctgctgatctgttctacccgcttggtgtgggctccctcagtgaa
gaaactatgcaatgcaagagcaaactgggactggatgagagcacgacgaggcaggcaatg
caactcttcaaggagaccaagaacatcctcaagtccagcatgtcttccttgggcggtgga
tcgcccgaggagatcgagaggttctggtatgcctgtgtcctttactgtgtatcaaggctc
agcaaagcagggaggtcgaaggaagatggtggtgtctcactctgccagatcttgagggca
tctaagctgaacattgtggattttttcaaggagatgccacagttctgcataaaggttgcg
cacattctgactggcctgtatggttcagattgggagaagaagcttgagttgaaggaactg
caagcgaacattgtccatttaagcttgctaagcaggtactacaagcgtgcataccaggag
ctattcttgtcaaatgatgccaagtattcagaaaattcttcagaatcaagcaaccaagag
gcttcagattattatcgctttggatggttgctttttttagtcttaagaatccaatcattc
agcagattcaaggatcttgtgacatcaacgaacgaactggtttctgtgttggctgtactt
atcattcacgttcctgtgcggctaaggagcttcaatgtaaaagattcaccctactttggt
aagaagtcagatcagggagtcaatcttattgcttctctgtgtgaaaaatatcatacttca
gaagatgaattgagcaaagcacttgagaagacaaacactctcataatggatattctgaaa
aataagccatgctctgcttcagaatgtcaacaggacagtttgtcttttattgatccagaa
ggtttgaaagtttttaaggatttgcttcagggaaactcattgaaatcaagtctgctaatc
ctagaaaaggaatatgacaatgcaattaactcaaaaggagagctagatgagcgcatgttt
gctaatgatgaggacagtttgcttggcagtggaagtctgtcaggtggagccgttaattta
ccaggcacgaagaggaagtatgatgttatggcctcgcctgcaaaatcaataacaagccca
agtccaatgtctcctccacgtttttgtttatcacctaaaggcaacagctttggcagctca
aagatggctcctatcactccagtgagcacagccatgacaactgctaagtggcttcggact
acaataaccccccttccttcaaaaccttctggggaactattgcgcttcttctcagcatgt
gataaggatttaacagaagacattacacacagagctggcattatacttggagccatattc
acaagtagttcttttggtgaacgcatatgtaccaatgtgcgaagcgcaaataggatggat
gctatctggacggagcaaagaaaaatggaagcccttaagctatattacagggttctggaa
tcgatgtgtagagcagagtcacaaattttgagtgggagcgggaacaatcttacatctctc
ttgtctaatgagcgatttcatcggtgtatgattgcctgttctgctgaattagttcttgca
acccataagactgtcactatgatgttcccagctgttctggagaaaactggcattacagct
tttgacttgagtaaagtcatagagggttttgttaggcatgaagatacacttcccagagag
ttgaagcgtcatctgaattctcttgaggaacggcttctggagagcatggcatggcagaaa
ggctcatcaatgtacaattccttgattgttgcaaggccagcactgtctgcagaaataaac
cggttaggtttactggctgaaccaatgccttcacttgatgccattgcagcgcatcataat
atctcattagggggcttgccacctcttcccttccaaaagcaggagcattcgccagataaa
gatgaagtcagatctcccaaaagagcatgcactgagagaagaaatgtgctggtggacaac
aattcatttagatcaccagtcaaggatatcatcaaatcgaagttaccacctcttcaatca
gcttttgcaagtccaacaagaccgaatcctgcagcaggaggtgaaacatgcgcagagaca
ggaataggtgtgttcttcagcaagataacaaaacttgccgccattagaatcagaagtctc
tgtgaaagattgcaactttctcagcaagttctggagcgagtgtatttcctcattcagcaa
atccttagccaacaaactgctcttttcttcaacaggcatattgaccagatcatactgtgc
agcatatatggagttgctaagatatctcaattggagctttcattcaaggagattattttc
ggctacagaaaacaacctcaatgcaagccacaagttttccgaagtgtttatgttcattgg
cccccaagatgcaggaacgggaaaacaggagaagatcatgtcgatattatcactttctac
aatgaagtatttattcctgctgccaagcctttgctggtggaggtagggcctggtgctagt
ccaaacaagaaagaagaggaaaaaggttctgtagatgtaggtccatttccagaatctcca
cggctagctcggtttccaaaccttcctgacatgtctccgaagaaggtttctgctactcac
aatgtatacgtctctccgctacgatcgtcaaagatggatattttgctctccccaagctca
aagagctactatgcatgtgttggcgagagtacctatgcgtttcaaagcccttccaaggat
ctgaaggctatcaataaccggctaaacagtgggaagaaagttagcggacgactgaacttc
gacattgtcagcgacctcgatgtcgccagcagcctcagcagtgatcaaaatgccaagcct
gcagcaatggaagtggttccggtcaagacaccggtgaaatgtgagccatctgactcgtga
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integrated database retrieval system
