Panicum virgatum (switchgrass): 120713077
Help
Entry
120713077 CDS
T07260
Name
(RefSeq) ABC transporter G family member 45 isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120713077
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120713077
Transporters [BR:
pvir02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
120713077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_29
ABC_trans_N
AAA_25
AAA_22
SMC_N
AAA
RsgA_GTPase
AAA_18
TsaE
AAA_23
AAA_16
ABC2_membrane_3
AAA_17
AAA_28
AAA_30
Zeta_toxin
NACHT
AAA_33
DO-GTPase1
Rad17
T2SSE
RNA_helicase
nSTAND3
DnaB_C
AAA_19
AAA_15
Viral_helicase1
FtsK_SpoIIIE
Pox_A32
AAA_5
Motif
Other DBs
NCBI-GeneID:
120713077
NCBI-ProteinID:
XP_039854991
LinkDB
All DBs
Position
6K:46754255..46763779
Genome browser
AA seq
1413 aa
AA seq
DB search
MEYSREPGRQPAAAAVEMSAGSEGEGWYDVVATAARKEPPPLTHDDNRGFLRMLREKKER
LGVEAARVEVRFERLTVEADVRVGRRAVPTLLNCAVNAAQELATSAHMCVTRKRPMRIIN
EVSGAIRPSRMTLLLGAPGSGKTTFLKALAGKLDSSLKFKGKVLYNGEEMSSSTPQYLRA
YVSQYDLHHAEMTVRETIDFSSKMLGTNNEFEMLGEAIRRKKGVINKMDQDLDSFIKVVS
HCTTLTKLDCILSSYSNNCFLQATTFGEGSNLTTNYIIKVTWLLQFAIYLDNIIVTVDYM
QILGLSECADTLVGDEMRRGISGGQKKRATIGEMLVGLARCFFMDDISTGLDSSTTFEIM
KFLQQMVHLMDLTMVISLLQPPPETLELFDDIILLCEGQIVYHGPRENATDFFETMGFKC
PSRKNVADFLQEVTSKMDQKQYWAGDPNKYQYHSIEKFAEAFRMSYLPRLAEEKLCSTNN
TGNEVKMNASRQISRWNIFKACFSREVLLLKRNSPVHIFKTIQITIMALVISTLFLRTKM
SHKSVLDANKYMGALFMAVVIVNFNGMTEIAMTIKRLPTFYKQRELLALPGWALLSSVFL
ISIPISLVETGLWTGLTYYVIGYAPSPIRFIQHFLVLFAMHQMSMGLYRFLAAIGRTQVM
ANMLGTAALIAIYILGGFVISKDDLQPWLRWGYWTSPFTYAQNAIALNEFHDKRWATEFY
YADANTVGEAILRIRGLLTEWQWYWICVSILFGYSLVFNILSILALEFMSSPHKHQVNIK
TTKANFEYHSQMVVNGNSSNDQVILPFRPLSLVFDHINYFVDMPKEMTKNGVTEKKLQLL
QDVSGAFRPGVLTALMGITGAGKTTLLDVLAGRKTGGYIEGTIKIAGYPKKQETFSRISG
YCEQSDIHSPNLTVYESLKFSAWLRLPSNVKPHQRDMFIDEVMSLVELTELKNAMVGIPG
ATGLSAEQRKRLTIAVELVASPSIIFMDEPTTGLDARAAAIVMRTVRKTVDTGRTVVCTI
HQPSIEIFESFDELLLMKRGGQLIYNGSLGPLSSNMTKYFEAISGVPRINKGQNPAAWML
DISSHITEYEIGVDYAEIYRNSSLYRENRLVIDELEQPEPNTEDLHFPQGYWQNFTTQCM
ACLWKQSCAYWKNSEHNIVRFINTIAVAIMFGTVFWKIGSTIKDEQDLFNVLGIVYASAL
FLGFMNCSILQPVVATERVVLYREKAAGMYSTMAYAIAQVSVELPYMLVQVLIFSWIVYP
MIGFELAAGKFLWFFLYLVMSFMYYTLYGMMTVALTPNIEIAMGLSFLIFIFWNVFSGFI
IAREMMPVWWRWVYWADPAAWTVYGLMFSQLGDRTEQIQVPGAGEQTVREFLEGYLGLQD
SHFELVTCLHLAIIGLFALLFFLAIKHLNFQRR
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atggagtacagcagggagccggggcggcagccggcggcggcggccgtggagatgtccgcc
gggagcgaaggcgaagggtggtacgacgtggtggccacggcggcgaggaaggagccgccg
ccgctcacccacgacgacaaccgcggcttcctccgcatgctccgcgagaagaaggagagg
ctgggcgtggaggcggcgagggtggaggtgcggttcgagaggctgaccgttgaggcggac
gtccgggtgggccgccgcgccgtgccgacgctgctcaactgcgccgtcaacgccgcccag
gaattagcaacatctgcccatatgtgtgttacaaggaaaaggcctatgaggataataaac
gaagtaagtggggccattcgaccatcaaggatgacactacttctaggtgcaccaggttca
gggaaaacaacttttctaaaagcattggcaggaaaattggattcttctttgaagttcaaa
ggaaaggtactgtacaacggagaagaaatgagctcctcaacaccacagtacctgcgtgct
tatgttagccagtatgatctccaccatgctgagatgacagtaagagagacgatcgacttc
tcttccaagatgctgggaaccaataatgaatttgagatgctaggagaagcaataagaaga
aaaaagggtgtcatcaataaaatggaccaggatcttgattcattcattaaggtagtttca
cattgtactacacttacaaaactggattgtattttgtccagttactcaaacaactgcttt
ctgcaggctaccacctttggagaaggaagcaaccttacaacaaactacattatcaaggta
acatggctacttcagtttgccatatatcttgacaacataatagtaacagttgattatatg
cagatacttggcttgtctgagtgtgctgataccctagtaggagatgagatgagaagagga
atatcaggagggcaaaagaaaagagccacaattggggagatgctagttggtcttgcaaga
tgtttctttatggatgatatatcaacaggtctagatagctccaccacatttgagatcatg
aaatttctccaacagatggtacatttgatggatctcacaatggttatttccttgctgcaa
ccacctcccgagacattggaattatttgatgacattatacttttatgtgaggggcaaatt
gtgtatcatggtcctcgagaaaatgctacagacttctttgaaactatgggattcaaatgc
cctagcaggaagaatgtagcggatttccttcaagaggtaacctcaaagatggaccaaaag
cagtactgggctggtgatccaaataagtatcagtaccattcaattgaaaaatttgcagaa
gcattccgaatgtcatatctccctcgactagcagaagaaaaactgtgcagtacaaacaat
actggaaatgaagtaaaaatgaatgcaagtcgccagatctccagatggaacattttcaag
gcatgcttttcaagagaagtgttgctcctaaaacgaaactctccggtacatatattcaag
accatacagataactattatggctttggtaatctccacacttttcctgagaacaaaaatg
agccataaatccgtacttgatgccaataagtacatgggagcgcttttcatggctgttgtg
atagtaaacttcaatggcatgactgaaattgcaatgacaataaagcggcttcccaccttc
tacaagcaaagggaactactagcattgccaggatgggcactcctctcttcagtttttctt
attagtatcccgatatcgcttgttgaaacaggcctttggacaggcttaacctactacgtg
attggatatgcaccttcacctatcaggttcatccagcactttctggtactttttgccatg
catcaaatgtcaatgggcctgtatcgcttcttggcggccataggaaggacacaagtgatg
gccaacatgctaggcactgcagctcttatagcaatctacatacttggaggctttgtcata
tcaaaagatgatctccaaccatggttgcgctggggatattggacgtccccgttcacctat
gcacagaatgcgattgccctcaatgaatttcatgacaaaagatgggctacagaattttat
tatgctgatgcaaacaccgtcggtgaagctatcctcaggatcagggggctgctcacggaa
tggcagtggtactggatttgtgtcagtattttatttggatactcgctggtcttcaacatt
ctcagcatattggcattagagttcatgagctctccacacaagcatcaagttaacatcaag
accactaaggcaaatttcgagtaccacagccagatggttgtgaatggcaattcgtcaaat
gatcaagttatcctcccatttcgacccctctcccttgtatttgatcacatcaactatttc
gttgacatgcctaaggagatgacaaaaaatggagtaacggagaaaaaacttcagctgcta
caagatgtcagcggtgcttttaggccaggagtgctaacagctctaatgggaataactggt
gctggcaagacaacattgctagatgtattagctggaagaaaaaccgggggatatattgaa
gggactattaaaatagcaggttaccctaagaagcaggagacattctcaaggatctcaggt
tactgtgaacagagtgatattcactcccctaatctgactgtttatgagtcactgaagttt
tctgcatggcttcgcctgccttcaaatgttaaacctcatcaaagagacatgtttatcgac
gaagtcatgagtctagttgaactcacagagttgaagaatgccatggtgggaattccaggg
gcaacgggcctgtcagctgagcagcggaaaagattaacaatagctgtggagctggtagct
agtccctctattatatttatggatgagccaaccactggcttggatgctcgtgctgcagca
attgtcatgagaacagtacgaaagacagtagacactggccgaactgttgtctgcacaatt
caccaaccaagcattgagatatttgaatcctttgatgagcttctgcttatgaaaagagga
ggtcagctcatatacaatggctcgctaggaccactatctagcaacatgacaaagtatttc
gaggcaatatcaggcgttcctagaataaacaagggccaaaatccagcagcatggatgcta
gacatcagttcacatataacagaatatgagattggagtggattatgcagaaatttatcgc
aactcctccctctacagggagaacaggcttgtaattgatgagttggaacaaccagaacca
aacacagaggatctacattttcctcagggttattggcaaaacttcacgacgcaatgcatg
gcttgcctgtggaagcaaagttgtgcgtactggaaaaactcggaacacaatattgttcgg
ttcataaacactattgccgttgcgatcatgtttggaaccgtattctggaaaatcggctca
accataaaggatgagcaagatttgttcaacgtacttgggatcgtatatgcgtcagcactg
ttcctgggcttcatgaattgcagcatcctgcagccggtggtggcaaccgagagagtcgtg
ctctaccgtgagaaggcggcgggcatgtactccaccatggcctacgccattgctcaggtg
tcggtggagttgccttacatgctggtgcaggtgctgatcttctcgtggatcgtgtacccg
atgatcgggttcgagctggcggcgggcaagttcttgtggttcttcctgtacctggtgatg
agcttcatgtactacacgctgtacgggatgatgacggtggcgctgacccccaacatcgag
atcgccatgggcctgtcgttcctcatcttcatcttctggaacgtcttctccggcttcatc
atcgcgagagagatgatgccggtgtggtggcggtgggtgtactgggcggacccggcggcg
tggacggtgtacgggctcatgttctcgcagctgggggaccggacggagcagatccaggtg
ccgggggccggggagcagacggtgcgcgagttcctggaggggtacctgggcctgcaggac
agccacttcgagctggtgacctgcctccacctcgccatcatcggcctcttcgccttgctc
ttcttcctcgccatcaagcacctcaacttccagcgcaggtag
DBGET
integrated database retrieval system
