Panicum virgatum (switchgrass): 120713088
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Entry
120713088 CDS
T07260
Name
(RefSeq) calcium-binding protein CBP-like isoform X1
KO
K13448
calcium-binding protein CML
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120713088
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Motif
Pfam:
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_5
EF-hand_8
Caleosin
Motif
Other DBs
NCBI-GeneID:
120713088
NCBI-ProteinID:
XP_039855009
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Position
6K:complement(47785962..47788556)
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AA seq
233 aa
AA seq
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MADYNRYGHTYAGGYTSHAPPPSSYGYGGYPSAYPPPPSQGTPGGFGGYGFVPVAFPPGT
HPDVERAFRAADRDCSGAIDEHELQGALSTAYHRFSIRTVRLLIFLFNDPAASSPSRMGP
AQFVSLWNCLGQWRGIFDRYDRDRSGKIDSRELTEALRSLGYAVPPSVIELLIANYNNGV
PSNGALDFDNFVECGMIVKGLTEKFKEKDTRYSGSATLTYDGFLSMVIPFIVP
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggccgactacaaccgctacggccacacctacgccggcggatacaccagccacgcgccg
ccgccctcctcgtacggctacggcggttacccgtcagcctacccgccgccgccctctcag
gggacgccggggggattcggcggatacggcttcgtccccgtcgccttcccgccggggacg
cacccggacgtcgagcgcgccttccgcgccgccgaccgcgactgcagcggcgccatcgac
gagcacgagctgcagggcgcgctctccaccgcctaccaccgcttcagcatccgcaccgtc
cgcctgctcatcttcctcttcaacgacccggccgcttcctcgccgtcacggatgggacca
gcacaatttgtatccctctggaattgccttgggcaatggcggggtatttttgacagatac
gatagggatcggagtggaaaaattgactcacgtgagttgacagaagctcttcgcagcctt
ggatatgccgttccaccttctgtcatcgagcttcttatagcgaattacaacaatggtgtg
cctagcaatggtgcactagactttgacaactttgtggaatgtggcatgattgtgaaaggg
ttaactgagaaattcaaggaaaaggatacccgatacagcggctcagcaactcttacatac
gatggattcttgtcaatggtcatccccttcatagtcccgtag
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