Panicum virgatum (switchgrass): 120713095
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Entry
120713095 CDS
T07260
Name
(RefSeq) probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY
KO
K09667
protein O-GlcNAc transferase [EC:
2.4.1.255
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00514
Other types of O-glycan biosynthesis
pvir03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120713095
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120713095
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120713095
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120713095
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.255 protein O-GlcNAc transferase
120713095
Glycosyltransferases [BR:
pvir01003
]
O-Glycan biosynthesis
O-linked GlcNAc type
120713095
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
120713095
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
120713095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
Glyco_transf_41
TPR_2
TPR_8
TPR_11
TPR_12
TPR_16
TPR_17
TPR_7
TPR_19
TPR_14
TPR_10
TPR_6
TPR_9
EST1_DNA_bind
TPR_Slam
NatA_aux_su
ARM_TT21_C
TPR_CcmH_CycH
TPR_15
TPR-S
ARM_TT21_2nd
ANAPC3
Wzy_C_2
DUF5008
Motif
Other DBs
NCBI-GeneID:
120713095
NCBI-ProteinID:
XP_039855015
LinkDB
All DBs
Position
6K:47825801..47832735
Genome browser
AA seq
908 aa
AA seq
DB search
MGQPGMDSVQGKESNGVAPDRNGGASPAKQQLEGKEALRYANILRSRNKFADAIQLYNIV
LEKEGANVEALIGKGICLQAQNLPRQAIECFTEAVKIEPENARALTHCGMIYKDEGHLVE
AAEAYQKARTADPSYKPASEFLAIVLTDLGTSLKLAGNTEEGIQKYCEALEVDNHYAPAY
YNLGVVYSEMMQFDTALTCYEKAALERPLYAEAYCNMGVIYKNRGELEAAIACYERCLTI
SPNFEIAKNNMAIALTDLGTKVKIEGDIKQGVAYYKKALFYNWHYADAMYNLGVAYGEML
NFEMANVFYELALHFNPRCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNL
GVVYTVQGKMDAAASMIEKAIIANPTYAEAYNNLGVLYRDAGIITLAIQAYERCLQIDPD
SRNAGQNRLLAMNYIDEGSDDKLYEAHREWGKCFMKLYPQDTSWDNSKIADRPLIIGYVS
PDYFTHSVSYFIEAPLTHHDYTNCKVVVYSGVVKADAKTLRFKDKVLKKGGLWRDIYGID
EKKVASLVREDKVDILVELTGHTANNKLGTLACRPAPIQVTWIGYPNTTGLPTIDYRITD
SLADPSSTKQKHVEELVRLPESFLCYTPSPEAGPVCPTPAISNGFITFGSFNNLAKITPK
VLQVWARILCAVPNSRLVVKCKPFCCDSIRQKFLSTLEELGLESLRVDLLPLIHLNHDHM
QAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGAVHAHNVGVSLLSKVGLGRLVAKT
EDEYVSLALDLASDVNALQELRMSLRELMMKSPVCDGEKFTRGLEAAYRNMWRRYCDGDV
PSLRRLELLQEHPIVNKQDSDKPAEKLADLKAQKENAAVEEDKQPPIMANVASSPASAKC
EANGHCSQ
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggggcagcccgggatggactctgttcaagggaaggagagcaacggcgttgcccctgac
cgcaatgggggtgcttctccagcaaagcagcagttggaagggaaggaggcgttgcggtat
gccaacatcctccggtcgcgcaataagtttgccgatgcgatccagttgtacaacattgtg
cttgagaaggagggtgccaatgtggaggcccttattgggaaagggatctgccttcaggcg
cagaacctaccaagacaggccattgagtgcttcacagaggctgtgaaaattgagccagaa
aacgcgcgtgctctcacacattgtgggatgatctacaaagatgagggtcacttggttgaa
gctgcagaggcatatcaaaaagctcggacagcagatccttcctacaaacctgcttcagaa
tttcttgctattgtgttgaccgatcttggaactagcttgaagcttgcgggaaatacagag
gaaggaattcaaaaatactgtgaagctctggaagtagacaaccactatgcgcctgcttat
tacaaccttggagtggtttattcagagatgatgcaatttgatacggctcttacttgttat
gagaaagcggcattggagaggccattgtatgccgaggcctactgcaacatgggagttatc
tataagaatcggggagaactagaagcagcaattgcctgctatgagaggtgcttgactatt
tctcccaactttgagattgcaaagaataatatggcaatagcactaactgacttgggaaca
aaggtaaaaattgaaggcgacatcaaacaaggtgtggcatattacaagaaagctctgttc
tataattggcactatgctgatgccatgtataatcttggcgttgcatatggtgaaatgttg
aattttgagatggctaatgtcttttacgagcttgctctgcacttcaatccgcgctgtgcg
gaagcatgcaacaatttgggagtaatatacaaggatagggataaccttgacaaagctgtt
gaatgttatcagatggcactgtcaattaagccaaatttctctcagtcactaaataacctt
ggagttgtttatactgttcagggcaagatggatgctgctgcaagtatgattgagaaggcc
ataattgcaaatcccacatatgctgaagcatataataatctaggtgttctttatagagat
gctggaattattactttagccatacaagcttatgagagatgccttcagattgatcctgat
tcacgaaatgctggtcagaaccgtttgcttgcaatgaactatattgatgagggctcagat
gacaagctttatgaagctcacagggagtgggggaaatgctttatgaaattgtatccacaa
gatactagttgggataactctaaaattgctgatcgtccactgatcatcggctatgtgtct
cctgattactttactcattctgtgtcctacttcattgaagctccgcttacacatcatgac
tacacaaattgcaaggtggttgtctactccggtgttgtgaaggcagatgccaagacactt
agattcaaggataaggtgttgaaaaagggtggattgtggagagatatatatggtattgat
gaaaagaaggttgctagcttggtaagggaggataaagtggacatacttgtggagcttact
ggtcatacagcaaacaataagttaggaacattggcatgccgacctgctcctattcaggtt
acctggattggctaccctaatacaacaggtttgccaacaattgactacagaatcacagac
tcattggctgatccatcaagtacaaaacaaaagcatgttgaagagttggtgcggcttcca
gaaagctttctttgttacactccctccccggaagctggtcctgtttgtccaactccagca
atttcaaatggtttcataacttttgggagttttaacaatctagcaaagattacaccgaag
gtattgcaagtttgggcccgaatattatgtgctgtcccaaactccaggcttgtggttaag
tgcaagccattctgctgtgacagtatacggcagaaatttttatcaacactagaggaattg
ggtttggagtcattgcgagtcgatttgttgccactcatccatctgaaccatgatcacatg
caagcatattccttgatggacatcagcctggacacatttccttatgctggaactaccact
acatgtgaatccttatacatgggggttccatgtgttacaatggctggtgcagttcatgct
cataatgttggtgttagcctactcagtaaagttgggttggggaggctggttgccaaaaca
gaagatgagtatgtcagcttagcgttggatttggcatcagatgtaaatgccttgcaagaa
ctgagaatgagcctccgagagctgatgatgaagtcacctgtctgtgatggagagaagttc
acacgtggcctggaagctgcatacaggaacatgtggcgcaggtattgtgatggggatgtg
ccatctctcaggcgcttagagctgttacaggaacatcctattgtcaataagcaagactcg
gacaagcccgccgagaagcttgcggatctgaaagcacagaaagaaaatgcggctgtggag
gaagataagcagcccccaataatggcaaatgttgcgagttcacctgcttctgcaaaatgt
gaagcaaatggccattgcagccaatga
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