Panicum virgatum (switchgrass): 120713121
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Entry
120713121 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 35-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120713121
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120713121
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MatE
DUF6803
SH3_17
DUF6688
Motif
Other DBs
NCBI-GeneID:
120713121
NCBI-ProteinID:
XP_039855050
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Position
6K:complement(48145579..48148231)
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AA seq
485 aa
AA seq
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MQPPEVVDGDTPALRSAADAARMVWDESKRLWGIGLPIAVGTLSAYALSSVTQMFAGHLG
NLPLAAASIGLSVFATFALGFLLGMGSALETLCGQAFGAGQVAMLGVYLQRSWIILLAAA
LLMSPLFVFAEPLLLLIGQDPDVAREAARFVLYILPAVFAMAINFAAGKFLQAQSKVTVP
AWIGLAALLANILLNYLFVVLLGWGLPGAAAAYDLAHWGIALAQAAYIIGWCGDGWKGWS
AAAFHDIWAFVKLSLESAVMLCLEIWYLGLITVLTGDLEDAQIAVDSLGICMSINGWEAM
IFIGLNAAISVRVSNELGSGRPRAAWNAVMVVVAEALLIGVLCMVLVLVFRDSFSIIFTS
DDDLRRAVSRIAGLLGITMVLNSVQPVISGVAVGGGWQGLVAYINLGCYYIFGLPLGYML
GYHLNFGVGGIWSGMLCGIALQTLILLAVVWRTDWKAEAAQASSRVQKWGGKGTDDEQVN
KPLLE
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgccggaggtggtggacggcgacacgccggcgctgcggtccgccgcggacgcc
gcgcgcatggtgtgggacgagtcgaagcgcctgtggggcatcggcctccccatcgccgtg
ggcacgctcagcgcgtacgccctcagctccgtcacccagatgttcgccggccacctcggc
aacctccccctcgccgccgcctccatcggcctctccgtcttcgccaccttcgcgctcggc
ttcctcctcggcatgggcagcgcgctcgagacgctctgcggccaggccttcggcgccggc
caggtcgccatgctcggcgtctacctccagcgctcctggatcatcctcctcgccgccgcg
ctgctcatgtcgccgctcttcgtcttcgccgagccgctgctcctgctcatcggccaggac
ccggacgtcgcgcgcgaggccgccaggttcgtgctctacatcctccccgccgtcttcgcc
atggccatcaacttcgccgccggcaagttcctccaggcgcagagcaaggtcacggtgccc
gcctggatcggcctcgccgccctgctcgccaacatcctcctcaattacctctttgtcgtc
ctcctcggctggggcctccccggcgcggccgccgcctacgacctcgcccactggggcatc
gcgctggcgcaggccgcctacatcatcggctggtgcggggacggctggaagggctggtcc
gccgccgccttccacgacatctgggccttcgtcaagctctcgctcgagtccgccgtcatg
ctctgcctcgagatatggtacctgggcctcatcaccgtgctcaccggcgacctcgaggac
gcgcagatcgccgtggactccctgggcatatgcatgagcatcaacggatgggaggccatg
atcttcatcggcctcaacgcggccatcagcgtccgggtctccaacgagctcggctccggc
agacccagggccgcgtggaacgccgtcatggtcgtcgtcgcggaggcgctgctcatcggc
gtcctctgcatggtgctcgtgcttgtcttcagggacagcttctccatcatcttcaccagc
gacgatgacctgcggcgcgccgtgtccaggatcgccggcctgctggggataaccatggtg
ctcaacagcgtgcagccggtgatctcgggggtggcggtcgggggtggatggcaggggctc
gtcgcctacatcaacctcggctgctactacatcttcggcctgcccctgggatacatgctc
ggctaccacctaaactttggagttggggggatttggtccggcatgctctgtggtattgct
ctccagacgctcatcttgctagccgtggtctggagaacagattggaaagcagaggccgcc
caagcttcaagccgcgtgcaaaagtggggcggcaagggcactgatgatgaacaagtcaac
aagcctctcctagaatga
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