Panicum virgatum (switchgrass): 120713132
Help
Entry
120713132 CDS
T07260
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 15a-like isoform X1
KO
K14972
PAX-interacting protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120713132
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL3/MLL4 complex
120713132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KIX_2
Med15_C
Med15_N
Motif
Other DBs
NCBI-GeneID:
120713132
NCBI-ProteinID:
XP_039855060
LinkDB
All DBs
Position
6K:48262242..48270938
Genome browser
AA seq
1323 aa
AA seq
DB search
MDGAANWRPTQGADPAAVAAAAGGVDPNAAAPAGGDWRTQLQPEARSRIVNKIMETLKKH
LPVSVPEGLSELQKIAVRFEEKIYTAATNQSDYLRKISLKMLSMESQTKTQQNPGNAQVI
PNQTPPGPGTMHQSPGLPPQGSNPAQSSAIPLMSQQQTRQPNASTSVQGSLPSLGQSLPG
VSQTSTLQNMSGMPQNTMNNGLAQGTPQDMYAAQRQMAGRQQQQQAQNQLIYQQQKMLMN
QKLQQNSLMQPHLQQQQSLLQSTQLQSSQQAMMQMSSGLQPGQSTISQTQPMAMQSATQS
GIQQNPLNSVQQSVQSLLQQPTQSVMRQQQHPQSSMHQQPSLQQTQPTQQSNIPLQQQQP
QLMGQQSNLQQNQLISQQNGAGLPVQSNNLLNIQQTQQMLNQQSMPLHQPQQLSPQGNMS
SLHQQQQQQQQQNQQQQQQLLGTVPNVSSMQRMHMSNKAIQQPEQQHHAQQASMGLMQPQ
SQQNQLQQSQHMMSQFQSQPNQLQQQLGMQQRLQTSAGMLLQQNNIDQKQYIQAPRGLQE
VSSSTSVDSTAQTGHPGAGDLQEEIYQMIKNLKDQYFAELNDLYNKISMKIQHVDNHMPA
QKSSDQYEKMKNFKALLERTLHFLQLNKSSIQPGFREKIPIYEKQIVNILNFQRRKPVQA
TGQQQFQQSVGQAPSSNISQQQQASGLQQHDSHTNQMPQASLPSISTGVQSSGAPGIQHV
SAPQATNFGVPTTQQNVTNALQAGSNLESAQGNNFNHVQHGSMGSTLQQGSTGPMQGAMN
AQQQSSSNLLSINAMSTMQPNTNSMQQNAGSLQQLKQQQQEHQIMQSQQIKRQQIIQHLQ
HQKQIHQSQLPMQQQLQKQQQQGQMQVPQLYSGNDMNELKVRQGPAMKSGMYLGQRNYYQ
QMKPGGAFPISSPQNLQASSPQISHHSPQVDQHNLLQSQLKTGTPLHSANSPFVPSPSPP
VAPSPIPVDSDKPLSNLSSLTSTGQAGHQQTSLPPQTQSIAVNTPGISASPLLAEFTSAD
GSQANVPTQVPTKSNAAERPLDRLLKALRTTQRQSLTAAVSDIDSVVSMIDRIAGSAPGN
GSRAAVGEDLVAMTKCRLQARNFITHDGSGTSKKMKRDTSAMPLNVSSPGSVNDGLKQSY
SVETPELQSTATSRVKCQKAEVNHALMEEIHEINQQLIDTELHVSEDDAESFAATSEGAE
GTVIRCTFTAVAVSPSLKSMFASAQMSPILPLRLLVPASYPKCSPVLLDKFPDEQSRNSD
DLSTKAKSKFGILLRGLAEPMSLREIARTWDACARKVISEYAQQTGGGSFSSSYGCWESC
VGA
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgccgccaactggcgccccacgcagggggccgaccctgccgccgtcgccgcc
gccgccggtggcgtcgaccctaacgccgccgctcccgccggaggcgactggcgcacccag
ctccagcccgaggcgcgaagcaggattgtcaataagataatggagactctgaagaagcat
ctgccagtatcagtgcctgaggggcttagtgagcttcaaaaaattgctgtgcgttttgaa
gagaaaatctatactgcagccaccaaccagtctgattatctgcggaagatttctctgaaa
atgctgtctatggagagtcagacaaagacacaacagaaccctggaaatgctcaagtgatt
ccaaatcaaacccccccaggtccaggtaccatgcaccaatcgcctggccttcctccacaa
ggcagtaatccagcacagtcatcagctatcccattgatgtctcagcaacagacacggcaa
ccaaatgcttctacatctgttcaaggttctctccctagtcttggtcagagcttgccgggt
gtcagccagacatccacgttgcagaacatgtctggaatgccgcaaaacaccatgaacaat
ggtttggcacagggtactccacaagatatgtatgctgcacaaagacaaatggcaggtagg
cagcagcagcagcaagcacagaatcagttaatttatcagcagcaaaaaatgttgatgaac
cagaaattgcagcagaactcactcatgcaaccacaccttcagcagcagcaatctttattg
cagtcaacacagctgcaatcttcacagcaggccatgatgcagatgtcatctggccttcag
cctgggcagtccaccatttcacaaacgcagcccatggctatgcagtccgctactcagagc
ggcattcaacagaatcctttgaactcagtacaacaatctgtgcagtcattactccagcag
cctacacaatctgtaatgagacagcagcaacatccacagtcctccatgcatcagcagcct
tctttgcagcaaactcagccaactcaacagtccaacattcctttgcaacaacagcaacca
caattaatgggccaacagtcaaatttacaacaaaatcagttaatcagtcaacagaatggt
gctgggctaccggttcagtcaaataatcttttgaatatacaacagacgcagcagatgttg
aaccagcaatcaatgcccttgcaccagcctcaacaattgtccccccagggaaatatgtca
agtctgcatcagcagcagcagcagcagcagcagcaaaatcagcagcagcagcagcagctt
cttggaactgtgccaaatgtttcaagcatgcaacgaatgcatatgtcaaataaggcaatt
cagcaaccagagcagcaacaccatgctcagcaggcatcgatgggtttgatgcaacctcag
tctcagcagaaccagcttcagcaatctcaacatatgatgtcacagttccagtctcagcct
aatcaactgcaacaacaattgggaatgcaacagagacttcaaacttcagctggcatgctt
ttgcaacagaataacattgatcaaaagcaatatattcaggctccgaggggccttcaagaa
gtttcatccagtacttctgtggattccactgctcaaactggtcatccaggtgcaggtgat
ttgcaagaggagatatatcaaatgattaagaacttaaaagaccagtactttgcagaactc
aatgatttgtacaataaaatatctatgaagatacaacatgttgataaccacatgccagct
caaaagtcttcagaccagtatgaaaagatgaagaacttcaaagcattgttggagcgcaca
ttgcacttcctgcaacttaacaagagcagcattcagccaggttttagagaaaaaatccca
atatacgagaagcaaattgtcaatatcctaaattttcaaagaaggaagcctgtgcaggca
acaggacaacaacagtttcagcaatctgttgggcaagctcctagctctaacatttcacag
caacaacaggcttcaggtttgcagcagcatgatagtcatactaatcagatgcctcaagca
agtttgcctagcattagcacaggagtacagtcctctggtgcacctggcatccagcatgta
tctgcgcctcaagcaacaaactttggtgttccaacaacacagcaaaatgtcacaaatgca
ctgcaggctggctctaatttggagagtgcccaaggaaataattttaatcatgttcagcat
ggttcaatgggttctacattgcaacagggaagcactggtcccatgcagggtgcaatgaat
gcacagcagcagtccagtagtaatttgttatccatcaatgcgatgagtacaatgcaacct
aataccaattccatgcaacaaaacgcaggctcattgcagcagctaaagcagcaacaacag
gagcatcagattatgcaaagtcagcaaataaagcgtcagcagattatacaacacttacag
caccaaaagcaaatacaccaatcacagctaccaatgcagcaacaattacagaaacaacag
cagcaagggcagatgcaggtcccacagctttattctggaaatgatatgaacgagctaaag
gttaggcaaggacctgcaatgaaatctggaatgtacctgggtcaacgcaactattatcag
cagatgaaaccgggtggtgcctttccaatttcttctccacaaaacctccaagcatcatcc
ccacaaatttcacaccattctcctcaggttgatcagcacaatctgttgcagtctcaactc
aagactggaacaccactgcattcagctaactcaccatttgttccatctccatccccacct
gttgccccatctcctataccagtggattcagataaaccactctccaacttatcatcactt
actagtactgggcaggctggacatcagcaaacttcccttccacctcaaacacaatcaata
gccgttaacacaccaggcatatctgcgtcacccttgctagcagaattcacaagtgccgat
ggaagtcaggctaatgtacctactcaagttccaaccaaatcaaacgcagcagaaaggccc
ctcgaccgcttgcttaaagcattgcgaacaacacagcgccaatcccttactgctgcagtt
agcgatatagattctgtcgtgagtatgattgacaggatcgctggatcagcacctggtaat
ggttctagagctgccgtgggtgaagatcttgtcgctatgacaaaatgccgcttgcaagcc
aggaatttcataacccacgacgggagtggtacatcaaagaaaatgaagcgggacactagt
gctatgcctcttaatgtctcatcacctggaagcgtcaacgatggcttgaagcaatcatat
agtgtggagactcctgagctgcaatcaactgcaacctcacgtgtcaagtgtcaaaaggct
gaggtgaaccatgctctaatggaggagattcacgagataaaccaacagctcatagacaca
gagctccatgtctccgaggatgatgctgagtcattcgcagctacatctgagggggctgaa
gggacagtcattagatgcacgttcactgctgttgctgttagccccagcttgaaatccatg
tttgcttcggcacagatgagcccgattctgcctttgaggttgcttgttcctgctagctac
cccaaatgctccccggtgctcctagacaagtttccagatgaacagagcaggaactcagac
gacctctctacaaaggccaagtcaaagttcggcatattgctccgcggtctagcagagccc
atgtcactgcgagaaatcgcaaggacatgggatgcctgcgcccgcaaagtgatctccgag
tacgcccagcagactggtggaggcagtttcagctcgagctacggttgctgggaaagctgc
gtaggcgcttga
DBGET
integrated database retrieval system
