Panicum virgatum (switchgrass): 120713165
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Entry
120713165 CDS
T07260
Name
(RefSeq) ABC transporter B family member 14-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120713165
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120713165
04147 Exosome [BR:
pvir04147
]
120713165
04090 CD molecules [BR:
pvir04090
]
120713165
Enzymes [BR:
pvir01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
120713165
Transporters [BR:
pvir02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
120713165
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120713165
CD molecules [BR:
pvir04090
]
Proteins
120713165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
ABC_ATPase
AAA_22
AAA_21
AAA_29
AAA_16
nSTAND1
Motif
Other DBs
NCBI-GeneID:
120713165
NCBI-ProteinID:
XP_039855105
LinkDB
All DBs
Position
6K:5579756..5587964
Genome browser
AA seq
846 aa
AA seq
DB search
MGSIYSNNQVIRPNTAGDIFIDGHSIKKLDLKLLRRNIASVSQEPSLFSGNIKDNLRIGK
MDANDEEIIEAATTANVHSFISKLPNEYLTEVGERGVQLSGGQKQRIAIARAMLKDPPIL
LLDEATSALDSESEKLVKDALEIAMRGRTVILIAHRMSTIVDADTIVVVENGRVAQTGTH
HELLEKNTFYSNVCSMQNIETEAEKKVASTSDNVIEEQIGEAHIRQSSIKQGTKNKLERV
ESKQQKREIVKEMHPFFRLWYGLHKEDILKILFGSSAAAISGISKPLFGYFIMTIGVAYY
DPDAKTKVSKYSLIFFTAGMVTLVSNILQHYIYGIVGEKAMKNLREDLFSAVLRNELGWF
EKPKNGVGFLTSRIVSDTSTVKTIISDRMAVIVQCISSILIAIIVSMYVNWRMGLVSWAV
MPCHFIGGLIQAKSAKGFYGDSAIAHRELVSLASEAASNIRTVASFVYEDEIIKKAELSL
QEPLKKTKRSRGIESMKYGVIQGISLCLWNIAHAVALWYTTVLVQKKQASFVNSIRSYQI
FSLTVPSITELWTFIPMVMSAIAILNPAFDTLDRETEIVPDKPENPSKGWLAGRTEFQDV
HFNYPSRPEVTILDGFNLIIEPGQKLALVGPSGAGKSSVLALILRFYDPCRGRVLIDNKN
IRDYNLRWLRKQIGLVQQEPILFNISIRDNISYGSESTSETEIIQAAMEANIHEFISGLP
EGYDTIVGEKGSQLSGGQKQRIAIARTLLKRPPILLLDEATSALDGESERVVMSSLGAKE
WTNKDDRARKVTSITVAHRLSTVINAEMIVVMEKGKVVELGNHETLISADDGIYSRLFHL
QSNMKD
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgggctcaatatactccaacaatcaggtaataaggcctaacactgcaggtgacatattc
attgacggccacagtatcaagaaacttgatctgaaattactgcgaagaaatatagcttca
gtctctcaggaaccatcactgttttctggtaatataaaggacaacttgaggattggtaaa
atggatgcaaatgacgaagagataattgaagcagcaacgacagccaatgttcattcattc
atatccaaactaccaaatgagtatttaacagaggtaggagaaaggggtgtgcagttatca
gggggccagaaacaaaggatagcgatcgcaagggcaatgctgaaggatccaccaatccta
cttctcgatgaagcaacaagtgcccttgattcagaatcagaaaagctagttaaagatgca
cttgagatagccatgcgcggaaggactgttatcttgatagcccacaggatgtccacaatt
gtagatgctgacactattgttgtcgtggagaatggaagagtagcacaaactgggacacat
catgagttgctcgagaaaaacacattttactccaatgtatgcagcatgcaaaatatagag
acggaagctgaaaagaaagtggcaagcacttctgataatgtaatagaggaacaaattggt
gaagcacacatcaggcagtcttctataaagcagggaaccaagaacaaactagaaagagtg
gagtcgaagcagcagaagagagagattgtaaaggaaatgcatcctttcttcagactttgg
tatggactgcataaagaggacattttgaagattctatttggttcctcagcagcagccatc
tctggaatctcaaagcccttgtttggttacttcatcatgacaattggtgtggcatattac
gatccagatgcaaaaacaaaagtcagcaagtattctttgatattcttcacagctgggatg
gtcacactggtcagtaacatcttgcagcactatatttatggtattgttggagaaaaggca
atgaaaaacctaagggaggacctcttctcagctgttcttcggaacgagcttggctggttt
gagaaaccgaagaatggcgtaggatttctgacctcgcgcattgtcagtgacacctcaaca
gtcaagaccatcatatcagacagaatggcggtcattgtacaatgcatctcttcaattctg
atagcaataatagtaagcatgtacgtcaattggcgcatgggtttagtttcatgggcagtc
atgccatgccatttcattggtggccttattcaagccaagtcagccaaaggattctacggt
gactctgctatcgctcaccgggaacttgtctcccttgcttcagaagcggctagcaacatc
cgaactgtggcatcctttgtttatgaagatgaaataattaagaaagcagaattgtcactg
caggaacctttgaaaaaaaccaagagatcccggggaattgaaagcatgaagtatggggtg
atccaagggatctcgctctgcctctggaatattgcacatgcagtggcgctctggtacacc
acagttctggtccagaagaagcaagcctcatttgtgaacagcataagatcataccagata
ttctcactcacagtaccttccatcacagaattatggaccttcattcccatggtcatgtca
gcaattgcaatactgaatcctgcatttgacacacttgacagagagacagaaattgtacca
gataaaccagagaatcctagcaaaggctggctcgccgggagaactgagtttcaggatgtg
cacttcaactatccatcaaggccagaggtgaccattctggatggattcaatctaattatt
gaacctggtcaaaaactagcattggttggcccaagtggtgcaggaaaatcctctgtactg
gctctaatactgagattctatgatccttgcagaggcagagtgttaatcgacaacaagaac
ataagggactacaatctcagatggctcaggaagcagattgggctagttcaacaagaacca
atcctgttcaacatatctatcagagataacattagctatggaagtgaaagcacttcagag
actgaaatcatccaagctgcaatggaggcaaacatccatgagttcatcagtggtttgcca
gaagggtatgacaccattgttggagagaaaggaagccagctttcaggagggcagaaacag
cggattgctattgcaagaactctattaaagaggcctcctattctgcttcttgatgaggca
actagcgctctcgatggtgaatctgagagggtggtaatgagctctttaggggctaaggag
tggacgaacaaagatgatcgagccagaaaggttacaagtataacagttgcacatagattg
tcgacagtcataaatgcggagatgatagttgtaatggagaaaggaaaggtggttgaactt
ggtaatcacgaaacattgatatctgcagatgacgggatttactcaaggttattccacttg
caaagcaacatgaaggattaa
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