Panicum virgatum (switchgrass): 120713250
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Entry
120713250 CDS
T07260
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 2-like
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120713250
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120713250
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GFIT
Motif
Pfam:
BTB
MATH_2
BACK_BPM_SPOP
Motif
Other DBs
NCBI-GeneID:
120713250
NCBI-ProteinID:
XP_039855177
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All DBs
Position
6K:13017632..13018699
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AA seq
355 aa
AA seq
DB search
MSTPMRTRRRSICTPVTEQGSHSFEISGYSLHKGMAKRDHISSGVFSVGGHDWAIRFIPN
GGCPDPGDGGGPTRPPFISIFLLLLSKGGKVRASCALSLVDHTTGLPSPTAARRTPEPLE
FSYGGPSMYLPHTGFMPRAELEDSPFLRDDRLTIHCDVTVIKRPLVLTNMFANEIPAPPP
NIGEHLGRLLETGVGADVTFAVDDGETVAAHKLMLAARSPVFMAEFFGPMEEATAARVAI
EDMRSDTFRALLHFIYTDDVRADADSELIQHLLVAADRYGVDRLKTVCESVLCDGLDVWN
VDNCPRLKNCCFEVVNRSDAAKAVKETRAYKDLKRKWPDILAEAFEFKTSRLRKK
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgccgatgaggacgaggaggcggtccatctgcacgccggtgacggagcagggc
tcgcactcgttcgaaatctccgggtacagcctgcacaagggcatggccaagcgcgaccac
atctcgtccggcgtcttctccgtcggcggccacgactgggccatccggttcatccccaac
ggcggctgccccgaccccggcgacggcggcgggccgacccggccacccttcatctccatc
ttcctcttgctcctcagcaaggggggcaaggtccgggcgtcctgcgccctgagcctggtc
gaccacaccaccgggctgccgtcgccgacggcggcgcgccggacgccggagccgctggag
ttcagctacggcggccccagcatgtacttgccgcacaccggcttcatgccccgcgccgag
ctcgaggactccccgttcctccgcgacgaccgcctcaccatccactgcgacgtcaccgtg
atcaagcgacccctggtgctcacgaacatgttcgcgaacgagatccccgcgccgccgccc
aacatcggcgagcacctcggccggctgctggagacgggggtgggcgccgacgtcaccttc
gccgtggacgacggggagacggtcgccgcgcacaagctcatgctcgcggcgcggtcgccg
gtgttcatggcggagttcttcgggccgatggaggaggcgacggcggcgcgcgtcgccatc
gaggacatgcgatccgacacattcagggccctcctgcatttcatctacactgatgatgtt
cgagctgacgctgacagcgaactgatccagcatctgcttgttgctgcagataggtatggt
gtggacaggttgaagacggtgtgcgagagcgtgctctgcgacggccttgatgtgtggaac
gtggacaattgccctaggcttaagaactgttgcttcgaagttgtgaatagatccgatgcg
gcgaaggcggtgaaggaaacgcgtgcttacaaggatctcaagaggaagtggcctgatatc
ttggcagaagcatttgagttcaagacgagcaggttgcggaaaaagtga
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