Panicum virgatum (switchgrass): 120713257
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Entry
120713257 CDS
T07260
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 1-like
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120713257
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120713257
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Gene cluster
GFIT
Motif
Pfam:
BTB
BACK_BPM_SPOP
MATH_2
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
120713257
NCBI-ProteinID:
XP_039855185
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Position
6K:complement(13655558..13656631)
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AA seq
357 aa
AA seq
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MATPTTVSTCTAATEQGKHVFEIFDYSKHRGMGSGEFIRSGTFSVGGFDWAIRFYPDGFD
TYSTNYISVYLELLSKDTRVRASCDLSLVDQTTGLPTSVHKTNLRVFNSGDLSRFAPPSG
TFMQRGVFEASAYLRDDHLTIQCITTVRKGPQVSAPALLNEIEVPPSNIGEHLWNFLDAG
EGVDVRFSVGGETFAAHKLVLAMRSPVFRAGLFGRMREAKEQLVTIEEMQPEVFRALLHF
IYTDSLPDMDGGPEGDVDREMIQHLLVAADRYAVDRFKLVCQSILRKKLDVETVSAAMAL
AYQHNCDRLKDICLDFITCSSSVMDSVVATQGYKNLKTTCPSALVDLFEKSRKLHKA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcccacgacagtgtcgacgtgcaccgcggcgacggagcaaggcaaacatgtc
ttcgagatctttgattacagcaagcatcggggtatgggcagcggggagttcatcaggtca
ggaacattctccgtcggtggattcgactgggccatccgcttctaccccgacgggttcgac
acgtacagcacgaattacatctcagtttacctcgagctcctgagcaaggacaccagagtg
cgggccagctgcgacctgagcctggtcgaccagaccaccgggctgccgacgtccgtgcac
aagacgaatctgagggtgttcaattccggtgatcttagcagatttgctccaccaagtggc
actttcatgcagcggggcgtgttcgaagcatcggcgtaccttcgggatgatcacctcacc
atccaatgcattactactgtaaggaaaggaccacaggtatccgcacctgcgttactgaat
gaaattgaggtcccgccatccaacattggggagcatctttggaactttttggatgcaggg
gagggagtggatgtcagattcagtgttggaggagagacctttgcagcgcacaagctcgtg
cttgcgatgagatcaccagttttcagagccgggctgtttgggcgaatgagggaggccaag
gaacagcttgtgaccatcgaagagatgcaaccggaagttttcagagccctgctgcatttc
atctataccgattctttaccagacatggatggtggtccagagggagatgtcgatagagaa
atgatccagcatttgctcgtggctgctgatagatatgctgtggacaggttcaaattggta
tgtcaaagcattcttcgtaagaagcttgatgtcgagactgtatcggctgcaatggcattg
gcttatcagcataactgcgacaggcttaaagatatttgcctagactttatcacctgttca
tcaagtgtgatggattcagtggtagcaacacaaggttataagaatctgaagacaacctgc
ccttctgcactagtagatttatttgagaagtcaaggaagctacataaagcataa
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