Panicum virgatum (switchgrass): 120713259
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Entry
120713259 CDS
T07260
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 2-like
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120713259
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120713259
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
TRAF-mep_MATH
Motif
Other DBs
NCBI-GeneID:
120713259
NCBI-ProteinID:
XP_039855187
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Position
6K:complement(13881785..13882888)
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AA seq
367 aa
AA seq
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MTSWCAPPARGVLSFEITGYSQHRALGAGTFIQSAAMDVGGYRWCIRCYPNGDSRKESKG
YVGVYLELLSKKAEVRALYELWLVDQEKGGRCSSLIYSARAPTLFSTRDAAAGGPKVCWG
AGWNKLMEWNALEASSSPYLKDDRLVIECHVTVIREPWVVESSSSSSAAAAVEAPRRSLS
QDFSKLLETKIGADVTFKVQGQAFAAHTCVLAARSPVFRAQFSGEHGAQQRSVTIQAEDM
EPAVFEALLRFVYTDSVSPSMAGLGADEKTEMWERLLVAAVRYDVEGLKLVCERALSEGL
DADTVASVLVLAARLNCDVLRDACVEYIAGTCRHRLRDVVASDGYGHLKASYPAVFVDLF
EKVARIR
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcctggtgcgccccgccggcgcgcggcgtgctctcgttcgagatcaccgggtac
agccagcaccgggccctcggcgccggcacgttcatccagtccgccgccatggacgtcggt
gggtaccggtggtgcatccgctgctacccgaacggggacagcaggaaggaatccaaaggc
tacgtcggagtctacctcgagctcctcagcaagaaagccgaggtgagggcgctctacgag
ctttggctggttgaccaggagaagggcgggcgctgctcgtcgctgatctatagcgccagg
gcgcccactctgttcagcaccagggacgctgccgccggcggccccaaggtttgctggggc
gccggttggaacaagctcatggagtggaacgcgctggaagcgtcgtcgtcgccgtacctc
aaggacgaccgcctcgtgatcgagtgccacgtcaccgtcatcagggagccatgggtggtc
gagagctcctcctcctcctccgccgccgccgccgtcgaggcgccccgccggagcctgtcg
caggatttctcgaagctgctggagaccaagatcggagccgacgtcaccttcaaggtccaa
gggcaagctttcgccgcgcacacctgcgtgctggcggcgcggtcgccggtgttcagggcg
cagttctccggcgagcacggcgcgcagcagcgcagcgtgaccattcaagcagaagacatg
gagcctgccgtcttcgaggcgctgctccggttcgtgtacaccgactcggtgtccccctcc
atggccggcctcggcgccgacgagaagaccgagatgtgggagcgcctgctggtggcggcg
gtccggtacgacgtcgaggggctcaagttggtgtgcgagagggccctgagcgagggcctc
gacgccgacaccgtggcgagcgtgctggtcctcgccgcccggctcaactgcgacgtgctc
agggacgcgtgcgtcgagtacatcgccggcacatgcaggcacaggctgcgcgacgtggtg
gcgagcgacgggtacggccacctcaaagcgtcgtaccctgccgtgtttgtggatctcttt
gagaaggtagctaggattcgctag
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