Panicum virgatum (switchgrass): 120713261
Help
Entry
120713261 CDS
T07260
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 1-like
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120713261
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120713261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
MATH_2
BACK_BPM_SPOP
Motif
Other DBs
NCBI-GeneID:
120713261
NCBI-ProteinID:
XP_039855189
LinkDB
All DBs
Position
6K:13888056..13889210
Genome browser
AA seq
384 aa
AA seq
DB search
MALSQGPVSPTASTCTAETARGRHTFVVAGYSLHRGLGAGKFIRSVTFHVGGHGWSVRCY
PDGHTGKDSNQDFVCVYIELMAAKQGAAEVRAVYDLRLVDLLTGESKVLFHPAAPRAFSG
ESPVWGARWFIRRTELEASTYLREDRLVIECDLTVIVAKQEASPQTPCEVIQAPPSDLPV
DLGKLLKTAEGADVAFKVQEETFRAHRVVLAARSPVFEAELYGPLREKSDGEAVIPVEGV
HPDAFRALLHFIYTDSLPATDDDLDGDESKEMVKHPLVAADRYAMERMKLVCASILCRRL
DVEGVSTTLALPDRYSCSELKDSCIQYVISSNSMDEVVASRGYEELKRACPATTVELWEK
ASSSKSHKIAYAEQRDERVLDELD
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtcgcagggtccagtgagcccgacagcgtcgacgtgcacggcggagacggcg
cgcggccggcacacgttcgtggtcgccgggtacagcctgcacaggggcctcggcgccggc
aagttcatccgctccgtcaccttccacgtcggcggccacggctggagcgtccgctgctac
cccgacgggcacaccggcaaggacagcaaccaggacttcgtctgcgtctacatcgagctc
atggcggcgaagcagggcgccgccgaggtgcgggcggtctacgacctgaggctcgtggac
ctcctcaccggcgagtccaaggtcctcttccacccggcggcgccgagggcgttcagcggc
gagagcccggtctggggcgcccggtggttcatacggcggacggagctggaggcgtcgacg
tacctgcgagaggaccgcctcgtgatcgagtgcgacctcaccgtgatcgtggcgaaacaa
gaggcctcaccccagacaccatgcgaggtcatccaagcgccgccgtcggacctgccggtc
gacttggggaagctgctgaagacggcggagggcgctgacgtggcgttcaaggtccaggag
gagaccttccgggcgcaccgggtcgtgctcgcggcgcgctcgccggtgttcgaggcggag
ctctacggaccactgagagagaagagcgacggtgaggccgtcataccggtggaaggcgtg
catcctgatgctttcagagcgctgctccacttcatctacacggactcgttgccggcaacg
gacgacgacctcgacggagacgagagcaaggagatggtcaagcatccactcgtggcggcg
gaccggtacgccatggagaggatgaagctggtgtgcgcgagcatcctttgcaggagactt
gacgtcgagggcgtgtcgaccaccctagctctacctgaccgctacagttgcagcgagctc
aaagattcctgcatccagtacgtcatctcttcgaatagcatggatgaggtggtggcgagc
cgagggtacgaggagctcaaaagggcgtgtcctgctaccaccgtggagttgtgggagaaa
gcatcatcatccaagtcgcacaagattgcgtatgctgagcagcgtgatgagcgcgtccta
gacgagctagattag
DBGET
integrated database retrieval system
