Panicum virgatum (switchgrass): 120713279
Help
Entry
120713279 CDS
T07260
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 1-like
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120713279
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120713279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BACK_BPM_SPOP
BTB
Motif
Other DBs
NCBI-GeneID:
120713279
NCBI-ProteinID:
XP_039855203
LinkDB
All DBs
Position
6K:complement(14350455..14351051)
Genome browser
AA seq
198 aa
AA seq
DB search
MCEIQVPPSDLPENLGKLLEGEEGADVTFKVKGVVFHAHKAVLAIRSPVFKAELWGPVGK
KNWCRITVQDMEPAVFKALLHFIYTDSLPAAGDLDGDDCNDDMVEDLLVAADRYAMERMK
LTCESILCRRVDVDNVAATLALADRHYCCKLKDACIRFINSGNRIKGVMASQGYEHLKKT
CPAIVMDLLEEAAKTLGC
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgagatccaggtgcctccgtcggacctgccggaaaaccttggcaagttgctcgag
ggggaggagggggcagatgtcacgttcaaggtgaaaggggtggtcttccatgcccacaag
gccgtgctcgcgatcaggtcaccggtgttcaaggcggagctttggggaccggtagggaag
aagaactggtgccgcataaccgtccaagacatggaacccgcagttttcaaggcgttgctt
catttcatctacacggactcactgcccgccgccggtgatcttgatggggatgattgcaat
gacgacatggttgaagatttacttgtggctgcagataggtacgccatggagaggatgaag
ttgacatgtgagagcatcctttgcaggagagttgacgttgacaatgttgctgccacttta
gctctagctgaccggcattattgttgcaagcttaaagatgcctgcattcggttcatcaac
tctggtaacagaattaagggtgttatggcaagccagggatatgagcacctcaaaaaaaca
tgccctgctattgttatggatttgttggaggaagctgctaagactttaggatgctga
DBGET
integrated database retrieval system
