Panicum virgatum (switchgrass): 120713407
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Entry
120713407 CDS
T07260
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 1-like
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120713407
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120713407
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Gene cluster
GFIT
Motif
Pfam:
BTB
BACK_BPM_SPOP
Motif
Other DBs
NCBI-GeneID:
120713407
NCBI-ProteinID:
XP_039855314
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Position
6K:complement(33063341..33064507)
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AA seq
315 aa
AA seq
DB search
MQGSVGKFVEISIPCGGPAAGDVVSLEIAFDDHAWTVLFEAIVLYRAAPAEAGGAGGAPP
RENYHASSVFEYPAEGARRFSWPRVASARDVQERCAVGGYATVVCGLAVLRHNPIPALPS
TFAADVASLLEARKKFGDPDASFAVGGKTFDVVRKVLAARSPVLRAELDGGATVTASTFC
ALLLYLYCDRLPRGTECGCPVTMDLVRDLLAAADWYALDRLKLLCARKLWDGLSVATVSK
TLWYADRYRCPELKSLCIDFLAVGDNFKNALRRGGLRLADEELAAGGPRDLDELRRRSSC
SSSSGSVSKKRKAQD
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcagggctcggtcggcaagttcgtcgagatcagcatcccgtgcggcggtccggccgcc
ggcgatgtggtctccttggagatcgcgttcgacgaccacgcgtggacagtgctcttcgag
gccatcgtgctgtaccgggccgcgccggccgaggcgggcggcgccggcggcgcgccgccg
cgcgagaactaccacgccagcagcgtgttcgagtacccggcggagggcgcccggcggttc
tcctggccgcgggtcgccagcgcccgggacgtccaggagcgctgcgccgtcggcgggtac
gccaccgtcgtgtgcggcctcgccgtgctgcgccacaaccccatcccggcgctgccgtcc
accttcgccgccgacgtcgcgagcctcctcgaggcccggaagaagttcggtgacccggac
gcgtcgttcgccgtcggcggcaagacgttcgacgtggtccgcaaggtcctcgcggcgcgg
tcccccgtcctcagggcggagctggacggcggcgccacggtgacggcctccacgttctgc
gccctgctcctctacctgtactgcgaccggctgccgcggggcaccgagtgcgggtgcccg
gtgaccatggacctcgtccgggacctgctcgccgccgccgactggtacgcgctggaccgg
ctcaagttgctgtgcgccaggaagctctgggacggcctgtccgtggccaccgtctccaag
acgctctggtacgccgaccggtacaggtgcccggagctcaagagcctgtgcatcgacttc
ctcgccgtgggggacaacttcaagaacgccctccgccgcggggggctccggctggccgac
gaggagctcgccgccggcggccctcgggacctcgatgagctcaggagaaggagcagctgc
agctcgtcctccggctctgtctcaaagaagcggaaggcacaggattaa
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