Panicum virgatum (switchgrass): 120713533
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Entry
120713533 CDS
T07260
Name
(RefSeq) probable transcription factor MYB58
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120713533
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120713533
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
120713533
NCBI-ProteinID:
XP_039855405
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All DBs
Position
6K:44077494..44079889
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AA seq
298 aa
AA seq
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MKPRGGRGGGGEQPAVRKGPWKAEEDEVLRRHVREHGPREWSSIRSKGLLPRTGKSCRLR
WVNKLRPDLKTGCKFSAEEERVVIDLQAQIGNKWARIATYLPGRTDNDVKNFWSTRQKRL
ARLLRAPVPRRRPGKQNCSAASSHAHELPTKQNLCLDMIPFQATTTPAHHTGESSSHDPR
AASQHRPGDAPFPGAHDLPPPPVPPLTHAGAAPTASAPAFLPYDGDYYAGDAVAGVDPLV
FVDPAACPEPLAVVPPGTFFGLDDDYVHGGRVLHPASSGVRFDDLPPETFDFFELPQL
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgcgcggtggccgtggtggcggcggcgagcagccggcggtgaggaaggggccg
tggaaggcggaggaggacgaggtgctgcggcggcacgtccgggagcacggcccccgggag
tggagctccattcgatccaaaggcctcctgccgcgcaccggcaagtcctgccgcctccgc
tgggtcaacaagctccggccggacctcaagacggggtgcaagttctcggcggaggaggag
cgcgtggtgatcgacctgcaggcgcagatcgggaacaaatgggccaggatcgcgacgtac
cttcccggacggacggacaacgacgtcaagaacttctggagcacgcggcagaagcggctg
gccaggctcctgcgggcgcccgtgccccgccggaggcccggcaagcagaattgcagcgct
gcttcttctcacgcccatgagctgcccactaagcagaacctgtgcttggacatgatcccc
ttccaggccacgacgacgccggcgcaccacaccggcgagagcagcagccacgatccgcgc
gcggcgagccagcaccgacccggcgacgcgccgttccccggagcgcacgacctgccgcca
cctcccgtcccgccactcacacacgccggagccgctccgacggcgtcggccccagccttc
ctgccctacgacggggactactacgccggggacgcggtcgccggcgtcgaccccctggtg
ttcgtcgaccccgccgcctgcccggagccgctggccgtggtgccgcccggcacgttcttc
ggcctggacgacgactacgtgcacggcggccgcgtgctgcacccggcctcgtccggggtg
cggttcgacgacctcccgccggagactttcgacttcttcgagctcccgcaactgtag
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