Panicum virgatum (switchgrass): 120713546
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Entry
120713546 CDS
T07260
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 2-like
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120713546
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120713546
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Gene cluster
GFIT
Motif
Pfam:
BTB
BACK_BPM_SPOP
MATH_2
MATH
BACK
MHC_I_C
Motif
Other DBs
NCBI-GeneID:
120713546
NCBI-ProteinID:
XP_039855417
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Position
6K:complement(44610388..44611537)
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AA seq
328 aa
AA seq
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MSSDSGSFEFNLDYSGTKNLVIGEYVCSKNFSAGGHRWRIICYPRGYSKEDNGEYLGIYL
QLMSESKNVRAIFDASMKGRDGEPSSSHESCVKVFPPEGYDSWGHPQFVKRSDLESRYVT
DGRATIVCVVTVDPVDVPPSDIGRHLGRLLDSADGSDVSFLVGGEEFPAHRVVLAARSPV
FKALLLGSMADARMASITLHDIAPATFKVMLRFIYTDDLHDHEDKYDNELGGPTAEMVQD
LLAAADRYALDRLKLLCARKLWDNVSVDRIGVTLACAEMYNCPELKKKCIDFFANEKNFK
KVVLTDGFVQLVYEFPSVLAELREKVGA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggactctggctccttcgagttcaatctcgactactcgggaaccaagaacctc
gtcatcggcgagtatgtctgctccaagaacttctccgccggagggcaccgctggaggatc
atctgctacccgcgcgggtacagcaaagaggataatggcgagtacctaggcatttatctt
cagctcatgagcgaatccaaaaacgtcagagctatcttcgacgcctccatgaagggaaga
gacggcgagccatcttcgtcccacgagagctgcgtgaaggttttcccacccgagggttac
gactcgtggggacacccccagttcgtgaagcgaagcgatctcgagtctcgctacgtcacc
gacggccgggcgacgatcgtgtgcgtggtcaccgtcgaccccgtggacgtcccgccatcc
gacatcgggcgccacctcggccgcctgctggattccgcggacggctccgacgtgtcgttc
ctcgtcggcggcgaggagttccctgcccatcgggtggtgctcgccgcccgctcgccggtc
tttaaggcgctgctcctcggatccatggcggatgccaggatggcatccatcaccttgcac
gacatcgcgcccgcgacgttcaaggtcatgcttcggttcatctacactgacgatctgcat
gaccatgaagacaaatatgataacgagcttggaggccctacggcagagatggttcaggat
ctactcgcggcagccgaccgctacgcgctggaccgcttgaagctactgtgtgccaggaag
ctatgggacaatgtgtccgttgacaggattggtgttactctggcctgtgccgagatgtac
aactgcccggagctgaagaagaagtgcatcgacttttttgcgaacgagaagaacttcaag
aaagtcgtgctgacagatggttttgttcagctggtgtacgagttcccgtcggttcttgct
gagctcagggagaaggtcggggcgtag
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