Panicum virgatum (switchgrass): 120713675
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Entry
120713675 CDS
T07260
Name
(RefSeq) probable galacturonosyltransferase 4
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120713675
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120713675
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
120713675
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120713675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
120713675
NCBI-ProteinID:
XP_039855551
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All DBs
Position
6K:41657261..41660500
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AA seq
605 aa
AA seq
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MGARDKESVVAAVDHGTRLGHGVGSRQNVDRRSGSDRSSESTVSKDRLLWNGEEMQEMES
EDAVKREHDHDVAITGKQGAVQLGKEKGRASDVEALHHKASARHDNSNVSLEKEISVDRS
SEQFRGGTSKEPDAKAVSTSHHTSQQPDAMIRVIKNQLRTSKTYIGLLPSRGRHAFVRDL
RRKMRDIQQALGDATSDKRLPKNVDGKIRAMELTLAKIKQVHDNCAAIIDKLLATLHSTE
DQVEAQKQKANYVAQIAAKAIPKRLYCLALRLTNEYYSSSTNKKQFPYEERFEDPNLQHY
ALFSDNVLAAAVVVNSTHINAKNPASHVFHIVTDKHNYAAMRMWFLANPIGETAVQVQNI
ADFLWLNSSYSPVLKQLESHFMINYYFNTNQDKPGKNPKFQNPKYLSILNHLRFYLPEIF
PKLNKVLFLDDDIVVQKDLSYLWSINLKGKVNGAVHTCGETFHRFDRYLNFSNPLIAKKF
DRRACGWAYGMNVFDLSEWRKQNITGVYHYWQNLNANRQLWKLGTLPAGLVTFWNHTFPL
DRSWHLLGLGYKPNVNQRDVERAAVIHYNGNRKPWLEIGLPVYRQFWSKYVNFDNVYLRE
CNINP
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcccgggacaaggagagcgtggttgctgcggtggatcatggcactcgattggga
catggtgtaggtagtcggcaaaatgttgatcggagaagtggttcagatagatcaagtgaa
tccacggtcagcaaggataggttactgtggaatggagaagagatgcaggagatggagtca
gaggatgcagttaagcgagagcacgatcatgatgttgccattaccggcaaacagggtgct
gtacagttgggaaaagagaagggccgtgccagtgatgttgaagccctgcaccacaaagct
agtgcaaggcacgacaattctaatgtttcattggaaaaggaaatttctgttgatagatca
tctgagcaatttagaggtggtacctcaaaagagcctgatgcaaaggcagttagtactagt
catcatacaagtcagcagccagatgctatgatacgtgtcatcaagaaccaattaagaaca
tcaaaaacatatattgggctcctaccttctagaggccgtcatgcttttgttagagacctc
cgaagaaagatgagggatatccaacaagcacttggtgatgcaacaagtgataagcggtta
ccaaagaatgtcgatggaaaaattagagcaatggagttgacattagcaaagatcaaacaa
gtacatgataactgtgcagctattattgataagctactagcaacccttcattcaactgaa
gatcaagttgaagctcaaaagcaaaaggctaactatgtagcacaaatagcagctaaggct
attccaaaaaggctctattgtcttgcactgcgtcttacaaatgagtattattcttccagc
accaacaaaaagcagtttccatatgaagaaaggtttgaagatccaaatctacagcattat
gccttattctcagataatgtactggcagctgcagtggttgtgaactcaactcatataaat
gctaagaatccagcaagccatgtctttcatatcgtgacggacaaacacaattatgctgca
atgagaatgtggttcttggcaaatcccattggagaaactgctgttcaggtccagaacatt
gcagactttttgtggctaaattcgagctacagtccagttctgaagcagctagagtcccat
ttcatgatcaactactacttcaataccaatcaggataagccgggtaaaaatccgaagttc
cagaatcccaagtacctgtccattctcaaccatctgaggttttatcttcctgagatcttc
ccgaagctgaacaaggttctatttcttgatgatgatattgtagtccagaaggatttaagt
tatctttggtctataaatctcaagggcaaagttaacggcgcggtccatacctgtggagag
actttccataggtttgataggtacctcaacttctcaaatcctctaatcgctaagaagttt
gatcgtcgtgcctgtggctgggcatacggcatgaacgtgttcgatttgtctgaatggagg
aagcagaatattactggtgtctaccactactggcagaatctgaacgccaacaggcaatta
tggaaattagggacacttcctgctggtcttgtcacattctggaaccacacattccccctc
gatcgctcatggcatctcttgggtctagggtacaagccgaacgtcaaccaaagggatgtc
gagcgcgcagctgttatacactacaacgggaatcgaaaaccttggcttgagattggactg
ccagtataccgccaattctggtccaagtatgtaaattttgataatgtttatctacgcgaa
tgcaacataaacccgtga
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