Panicum virgatum (switchgrass): 120713693
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Entry
120713693 CDS
T07260
Name
(RefSeq) chloride channel protein CLC-f-like
KO
K03281
chloride channel protein, CIC family
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120713693
Transporters [BR:
pvir02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
120713693
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
YLDV-IL18BP-like
Motif
Other DBs
NCBI-GeneID:
120713693
NCBI-ProteinID:
XP_039855573
LinkDB
All DBs
Position
6K:41822872..41828650
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AA seq
747 aa
AA seq
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MAGSDLEPLRAGAAALPSSSDPDSPAATPRRSRMRDLLRNLDRRLSNRSRGGEGAAAPGH
SGAEAGASPRRGEEDSDELGDGAPPEWALLLVGCLLGLATGICVAAFNRGVHVIHEWAWA
GTPTEGAAWLRLQRLADTWHRILLIPVTGGVVVGMMHGLLEIFEQIKQSLSSQREGIDPM
AAIFPTIKAIQAAITLGTGCSLGPEGPSVDIGKSCANGCAEMMENNRERRIALVAAGSAA
GIASGFNAAVAGCFFAIETVLRPLRAENSPPFTTAMIILASVISSTVSNVLLGEKAAFIV
PTYELKSAAELPLYLILGMLCGVVSVAFRQLVVWFTKTFDLIRKKFGLPAVVCPALGGLG
AGLIALRYPGILYWGFTNVDEILHTGKSASAPGIWLLAQLAAAKVVATALCKGSGLVGGL
YAPSLMIGAAVGAVFGGSAAELINSAIPGNTAVAHPQAYALVGMAATLASVCSVPLTSVL
LLFELTKDYRILLPLMGAVGLAIWVPSVVNQSGSKDSEATSPRHGYSSLLPPADRNETDW
RRQDRDDVELAILDVDPYNYGSNNEEMLLDDLKVSQAMSKHYVKVTPAFTIKETTRLMQE
KQQSCVLVVDNEDFLEGIVTLGDIRRKGYEPSENSHSTGENSSTLDENSSPVSTCLTRGF
QFHGNERGLVTCFPDTDLSTAKVLMEVKEIKQLPVVKRGAGRRNDGRRKVLGLLHYDSIG
WCLREELERWKAIYQRENFQQTTVNGH
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggcggggagcgacctagagccgctgcgcgccggcgcggccgcgctgccgtcctcgtcg
gacccggactcgcccgccgcgaccccgcggcggagccgcatgcgggacctcctgaggaac
ctggaccgccggctctcgaaccggagccgcggcggcgagggcgccgcggccccggggcac
agcggcgcggaggcgggggcttcgccgaggaggggcgaggaggacagcgacgagctcggg
gacggcgcgccgcccgagtgggcgctgctgctcgtcgggtgcctcctcgggctcgccacc
ggcatctgcgtcgcggcgttcaatcgcggggtgcatgttatacatgaatgggcatgggca
ggcacaccaacagagggtgctgcttggctccgtcttcagaggctggccgatacttggcat
aggattttgttgattccagtaactggtggagtagttgttgggatgatgcatggattattg
gagatcttcgagcagataaagcaatcattatcatctcaaagggaaggtattgatcctatg
gccgcgatctttcccacaattaaggccatccaagccgccattactttaggaacggggtgt
tcactggggccagaagggcctagtgttgatattggcaaatcttgtgcaaatggatgtgct
gaaatgatggagaacaacagggaacggaggattgctcttgttgcagctggatcggctgct
ggaatcgcatcaggttttaatgcagcagttgctggatgcttttttgctatcgaaacagta
ttgaggccccttcgagcagagaactcaccaccatttactactgccatgattatattggca
tcagttatatcatcaactgtgtccaatgttttgctaggggaaaaggcagcgtttattgtc
ccgacgtatgaactaaaatctgctgctgagttgccactctaccttattctaggcatgctt
tgtggagttgtgagtgtggcattcaggcagttggttgtttggttcaccaagacttttgac
ttgataaggaaaaagtttggccttcctgctgtagtatgtcccgctttaggtggtcttgga
gcaggtttaatagcactaaggtaccctggcatattgtattggggtttcactaatgttgat
gagattttacatactggtaaaagtgcttctgcccctggaatctggcttttagctcaatta
gctgctgcaaaagttgtagcaactgcactttgcaaaggttctggtcttgttggtggcctt
tatgctccaagtttgatgattggtgctgctgttggtgctgtttttggaggctcagcagca
gaattaataaactctgccattccgggtaacactgctgtcgcacatcctcaagcttatgcg
ctagtgggaatggctgctacgctggcttcagtctgttctgtcccattgacatctgtgcta
ctgctctttgaattgaccaaggattacagaattctacttcctctgatgggagctgttggt
ttagcaatatgggttccctctgttgtaaatcaatctggtagcaaagatagtgaggcaaca
tctcctcgacatggttactcttcactattacctcctgctgataggaatgagacagattgg
aggcgacaagatagggatgatgttgaacttgcaattcttgatgttgatccctacaactat
ggtagtaacaatgaggagatgcttctagatgacttaaaggtatcgcaagcaatgtcaaag
cattatgtgaaggtcacgcctgcattcaccatcaaggagacaacaaggcttatgcaagag
aagcagcaaagttgtgttcttgttgtagataatgaagattttctcgagggaattgtaaca
ttaggtgatattcgtcgtaaaggatatgaaccaagtgaaaattctcatagtacaggggaa
aattcatctaccttggatgaaaattcttctcctgtctcaacatgcctcacacgaggtttt
cagttccatggcaacgaaagaggactagtaacctgctttcctgatacagacctgagcact
gctaaggttctaatggaagtgaaagaaattaagcaacttccagtggtcaaacggggtgct
ggtcgaagaaatgatggaaggcgcaaggtccttggtcttcttcattatgattcaatagga
tggtgcttgagggaagagcttgagcggtggaaggcaatataccagagagagaatttccag
cagacaacagtgaatgggcactga
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