Panicum virgatum (switchgrass): 120713724
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Entry
120713724 CDS
T07260
Name
(RefSeq) wall-associated receptor kinase 2-like isoform X1
Organism
pvir
Panicum virgatum (switchgrass)
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Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
GUB_WAK_bind
EGF_CA
EGF
cEGF
hEGF
EGF_3
Motif
Other DBs
NCBI-GeneID:
120713724
NCBI-ProteinID:
XP_039855612
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Position
6K:42580651..42584317
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AA seq
850 aa
AA seq
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MMAFCTSLLLLSLSLPLSSLCPLLECLHLHQAAAPLCCCSAVPQRALTLLSQADMKKAAC
RGFTALAAIVGSLLLLGAGGAAPAAAAATGSGRNNCTRSCGGIDISYPFGVEPGCYHAAW
FNLTCDLSFRPPKLFLGDGTVQVLEISVPNGMVRINSSRLLYTVGAGASAASGPWGRGLP
IGGPFFLSESRSSVALVGCGAQVQLRGGDDESLIASCAAVCPLDGDRRIVVESSGACAGV
GCCQANIVLGYDSYNIQVNRLNASVYAEAAVYLVDQGISYADEVAGSVSGYFPEALPATL
DWVINHTGCPSVYRDEVASECVSSSSRCVEAGNNVPNRGRRCACDIGYQGNPYIPDGCQD
IDECMSPDIYPCHGICTNGLGNFICECRSGYYGNASAPDGCQDINECLSQEAHSCYGTCL
NLPGTFHCQCPIGTNGNSSRKGGCVPIKNSSPVSGLGIGLGVSGGTSLLLLAFGAPFIIR
KLKERKVQKMKEKYFNQNHGLLLQQMISHKADIGERMIITLRELEKATDNFDRSRVVGGG
GHGVVFKGIIDLHVVAVKRSKIVVQREIDEFINEVAVLSQVNHRNVVKLLGCCLETEVPL
LVYEFISNGTLYHHLHIEGPISLRWDDRIRIALEVARALSYLHSAASMPIFHRDIKSSNI
LLDDNLTAKVSDFGASRYIPIDQTGVTTAIQGTIGYLDPMYYYTGRLTDKSDVFSYGVLL
IELLTRKKPFVYRSDGGDGIVSYFVSLLTKGKLFDIIDPQVIEEEDGEVQEVATLAAMCT
KLKGEDRPTMREVEMTLENLLVKKKQVPWNTTSRKYGDDETTAHWMSSEQVSTEASRQYT
IEEETLLSAR
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgatggcattttgcacctcgcttctactcctctcactctctctccctctctctagcctc
tgcccactgctcgagtgcttgcatttgcatcaagccgccgcccctttgtgttgctgctct
gcagttccacagagggctttgacgctgctgagccaggccgacatgaagaaggcagcttgt
agaggatttacagccttggctgccatagtcggctcgttgctgctgctcggcgccggcggc
gcggcaccagctgcggcggcggccaccggctcggggaggaacaactgcaccaggagctgc
ggcggcattgacatctcgtacccgttcggcgtcgagcccgggtgctaccacgccgcctgg
ttcaacctcacctgcgacctctccttccggccgccgaagttgttcctgggcgacggcacc
gtgcaggtgctggagatctccgtccccaacggcatggtgcgcatcaacagcagccggctg
ctgtacacggtcggcgccggggccagcgccgcgagcgggccgtggggccggggcctcccg
atcggcgggcccttcttcctgtccgagtccaggagcagcgtcgcgctggtgggctgcggc
gcccaggtccagctccgcggcggggacgacgaaagcctgatcgcctcctgcgccgccgtc
tgcccgctcgacggcgaccgccggatcgtcgtcgagtccagcggcgcctgcgccggcgtc
ggctgctgccaggcgaacatcgtcctgggctacgattcctacaacatccaggtcaacagg
ctcaacgcatcggtttacgccgaagctgccgtctacttggttgaccaggggattagctac
gccgacgaggtcgccggcagtgtctccggctactttcctgaggcgctcccggccacgctc
gactgggtgatcaaccacacagggtgcccgtcggtgtacagggacgaagtcgccagcgaa
tgcgtcagctccagcagcagatgcgtcgaagcaggtaataatgttcccaatcgtgggcgt
cggtgcgcctgcgatattggttatcaaggcaacccttacatcccggatggatgccaagat
atcgacgagtgtatgtctccagacatctacccatgtcatggcatctgcacaaatggatta
gggaattttatttgcgagtgccgttctgggtattacggaaatgcttctgccccagatgga
tgccaagacataaacgagtgtttgagccaggaagcccactcgtgctatggcacctgccta
aacttgcctggaactttccattgtcaatgtccaattggaaccaatggaaattcttccaga
aaaggggggtgcgttccaataaagaactcatccccagtttcaggtttaggcatcgggcta
ggagtatctggtggtacaagtcttttgcttctagcatttggtgctcccttcataattcgg
aaactcaaggagagaaaggtgcagaagatgaaagagaaatatttcaaccaaaatcatggt
ttactattgcagcaaatgatatcgcataaggcagacattggcgaaaggatgataattaca
ttaagggagctggagaaggctacagacaattttgataggtcccgcgtagttggcggggga
ggacatggtgttgtgttcaagggtattatagatctgcatgttgtggcagtcaagagatca
aagattgtagtgcaaagagaaattgatgaattcataaatgaagttgcggttctttctcaa
gtgaaccatagaaatgtagtgaagctcttaggatgttgccttgagacagaggttccactg
ctagtttatgagttcatatcgaatggaactctttatcatcatcttcacattgaaggacct
atatcacttagatgggatgacaggatacggattgcactagaagtggctagagcgctctcc
tatctacattcagcggcctcaatgccgatatttcatagagatattaagtcctcgaatata
cttctggatgacaatttaactgccaaggtatcagactttggagcttcaagatatatccca
attgatcagacaggtgtaactacagcgattcaaggtacaattggttacttggacccaatg
tactattacacaggccgactaacagacaagagtgatgtcttcagctatggggttcttctt
atagaattgcttactaggaagaaaccatttgtgtatcgatctgatggcggtgatggcatt
gtttcatattttgtctcactattgacgaaaggcaagttgtttgatataatagatccccaa
gtcatagaggaagaagacggagaagtccaagaagtagccacactagcagcaatgtgcact
aaactgaagggagaggatcggcctacaatgagagaagtagagatgacacttgagaattta
ctagttaagaagaaacaggttccgtggaatacaacatcaaggaaatatggcgatgatgaa
actacggctcactggatgtcaagcgagcaagtttctactgaagcaagcaggcagtacaca
attgaagaggaaacattgttgtcagcaaggtag
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