Panicum virgatum (switchgrass): 120713760
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Entry
120713760 CDS
T07260
Name
(RefSeq) protein SHI RELATED SEQUENCE 1-like
KO
K27807
short internodes/stylish family transcription factor
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120713760
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
120713760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
120713760
NCBI-ProteinID:
XP_039855666
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All DBs
Position
6K:complement(47093541..47095554)
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AA seq
305 aa
AA seq
DB search
MAGFPLGGGGGGGHHGRGGGDHHHHYPHVSPSSGSDSAAAAAAAYLYTTAAAAPRGGGFQ
LWPHHPVQEHHFYAPNIIRFADDPAAGSSSSRSGRGSASGAGAGTISCQDCGNQAKKDCA
HMRCRTCCKSRGFDCPTHVKSTWVPAAKRRERQQQLATGAAEPSKRPRDAGAQPSSTTAT
TTSSGEQQQQMAMVGERYPREVSSEAVFRCVRLGPVDEAYAEVAYQTTVSIAGHVFKGIL
HDVGPDPSAAAAGGFRHAAEGSSPSTAAAGEGSVAGPVSSSAVVMDPYPTPGPYGGPPFF
HGHPR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcttccctctaggaggcggcggaggaggagggcaccacggccgcggcggcggc
gaccaccaccaccactacccccacgtcagcccttcctccggctccgactccgccgccgcc
gccgccgcggcatacctctacacgacggccgccgccgcgccccggggcggcgggttccag
ctctggccgcaccacccggtgcaggagcaccacttctacgcgcccaacatcatccgcttc
gccgatgaccccgccgcgggctcctcatcctcgcgcagcgggaggggctccgcctccggc
gccggcgccggcaccatcagctgccaggactgcggcaaccaggccaagaaggactgcgcc
cacatgcgctgccgcacctgctgcaagagccggggcttcgactgcccaacgcacgtcaag
tccacctgggtgcccgccgccaagcgccgcgagcgccagcagcagcttgccaccggcgcc
gccgagccatccaagcgaccgcgcgacgccggcgcccagccttcgtccaccacagccaca
accacttcctcgggagagcagcagcagcagatggccatggtgggcgagcggtacccacgg
gaggtgagctcggaggcggtgttccgctgcgtgcgcctgggccccgtcgacgaggcctac
gccgaggtcgcgtaccagaccaccgtcagcatcgccggccacgtcttcaagggcatcctg
cacgacgtcggcccggacccgtccgccgcggccgccggcggcttccgccacgccgccgag
gggtcctccccgagcacggccgcggcgggcgaaggcagcgtcgcggggcccgtgtcgtca
tcggctgtggtcatggacccgtacccgacgcccggcccctacggcggcccgcccttcttc
cacggccatccgaggtga
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