Panicum virgatum (switchgrass): 120713764
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Entry
120713764 CDS
T07260
Name
(RefSeq) MYB-like transcription factor ODO1
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120713764
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120713764
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
YjcZ
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
120713764
NCBI-ProteinID:
XP_039855669
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All DBs
Position
6K:complement(47155069..47158847)
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AA seq
261 aa
AA seq
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MGRQPCCDKQGVKRGPWTAEEDKKLISFILTHGRCCWRAVPKLAGLLRCGKSCRLRWTNY
LRPDLKRGLLSTAEEQLVIDLHAKLGNRWSKIAAKLPGRTDNEIKNHWNTHIKKKLIKMG
IDPATHQPLANCKASTSQSTDTAESTKSSDTRDEQGVKEGRRRDMALPTDSSEQSSWLES
GNKASGQDHEQLVNWLSETDLPMDEPWLNFTSTNDDALCTVEEPLPWDGATDWLLDYQDF
SMCSSNLIGNSTLPSSDGSNF
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggggaggcagccctgctgtgacaagcagggggtgaagagggggccgtggacagcagag
gaggacaagaagctcatcagtttcatcctgacacacggccgatgctgctggcgagcagtg
cctaaactggcagggctgctgcgctgcggaaagagctgccggttgcggtggactaactac
ctccgccctgatctcaagcgtggcctcctcagcactgccgaggagcagctcgtcattgat
ctccatgccaagctcggcaatagatggtccaagattgctgccaagttacctgggagaaca
gacaacgagatcaagaaccactggaacacacacattaagaagaagctcatcaagatgggc
atcgacccagccacgcaccagcctctggccaactgcaaggcgtctacttcacaatccact
gatacagctgagtcgacaaaatccagtgacaccagagacgagcagggcgtgaaggaaggt
agacgtagggacatggcactgcccactgactcgtcggagcagtcaagctggcttgagtca
ggaaacaaagccagtggtcaggaccatgagcagctggtgaattggctgtcagagacggac
ctgcccatggatgagccgtggctgaattttacgagcaccaacgatgatgcgctttgcacc
gtggaggagccattgccttgggacggagcaacagactggttgcttgactaccaagatttt
agcatgtgcagctcgaacttgatcggcaattcaacacttcccagctcagatggatcaaac
ttctga
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