Panicum virgatum (switchgrass): 120713820
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Entry
120713820 CDS
T07260
Name
(RefSeq) peroxisome biogenesis protein 1-like
KO
K13338
peroxin-1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120713820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120713820
Membrane trafficking [BR:
pvir04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
120713820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_lid_3
AAA_16
ATPase_2
AAA_14
AAA_22
ORC-CDC6-like
AAA_5
AAA_lid_PRS2_C
RNA12
nSTAND3
Motif
Other DBs
NCBI-GeneID:
120713820
NCBI-ProteinID:
XP_039855733
LinkDB
All DBs
Position
6K:47592607..47605404
Genome browser
AA seq
1026 aa
AA seq
DB search
MSGGGMEVEVRVVGGARSCFIALPLHLIHALERTSASGDLPPVLALELRGPAGGRWSLAW
SGAASRSRAIEVAQELADCISLPDGTIAQLSVARSLAKADSVSIEPYSEDDWEILESRAE
LAEETILKQVGIVYEGMKFPLWLDGHNIVKFVVVSSCPEKSVVRLVPGTEVAVAPKKRKE
PSQDVKKQSTLEEPVKTKALLRVQQADRKHIHTFKYKGVDIGVVLSYAVLIHPDTATSVS
VGNLQLVTVSPKSSKKGLAQNGKEVAQKKGISVAKERTLEAVVYILLSDSVAKGHVMLPY
SIRHFISADVHSWVYINTYSANITKDEPLVTISSLRFKMHVKGAHGNSELVTQEGDTSKI
TRISPENDDFFQEAHYGESKSLQGADIESISESVSKQKFFLKHWLIGQLKEMCLHASHTE
ISSIVLPANVVLHFEVAHKKPNRGVELLYLLTFTSENSSFDNTQLKVETAWSAPIGNPEN
VELHFRKLELGEPVSFGSIMDSSATNGFKLTRSSLGWMETAMSDVTKRLSVLLSLTSLRL
FNRLKFPFPGHVLVYGPRGSGKTALTRASAKYFEDHKEILAHVIYRDCSKLALGKAKETR
QAIEDSISEALLHSPSIIIFDDLDSVISVSSDPQVSQSSSSSDSLVRYLADIMDDYRDKT
RSTCGYGPIAFMASVQSLQSLPQDLTSSGRFDFHIELPALAVPQRNALLKHQVEEHELQC
SEEVLSEIASKCEGYDAYDLEILVDRAVHAAASRFVLPSNASPNSVKPTLVMEDFSKAMH
GFLPVAMRDLRKYAPDDKDGGWEDVGGLNEAVTIIKEVRDFFAKAAAAAPCLLFFDEFDS
IAPQRGTHSAGVSDRVVNQFLTELDGVETLTGVFVFAATSKPQLIDAALLRPGRFDRLVF
CDFPRWDERLEILKVHSRTVSLASDASLEDVASLTKGFTGADLAAILTDAGLAAVHELLD
NQGNGIPEREPCISKELLMSVTRKARPSTPADEKRRYDREFGEFVSSRKSISTKARESKG
KKVTLA
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcggcgggatggaggtggaggtccgcgtggtgggcggcgcgcggagctgcttc
atcgcgctcccgctccacctcatccacgccctcgagcgcacctccgcgtccggcgacctc
ccgcccgtcctcgcgctcgaactccgcggccccgccggtggccgctggtccctcgcctgg
tccggcgccgcgtcccgatcccgcgccatcgaggttgcacaagaattggcagactgcatt
tcactgcctgatggaactatagcacagctgagcgtagctcgctctctggccaaagctgac
tcagtcagtatagaaccatacagtgaggatgactgggagatactggagagccgtgctgag
ttggctgaagaaacaatcttgaagcaggtcggcatcgtttatgagggtatgaaattcccc
ttgtggttggatggccataatattgtgaagtttgttgtggtgtcatcttgcccagagaag
tcagttgttcgacttgtgccaggaactgaagttgctgttgcacccaaaaaacgcaaagag
ccttctcaggatgtgaaaaagcaaagtacactggaggaaccagtaaaaacaaaggcgctc
cttcgtgtacaacaggctgataggaagcatatacatacgttcaaatataaaggtgttgac
ataggggtggttctcagctatgctgtgctaatacaccctgatacagctacaagcgtttcg
gttggcaatctccaattggtcactgtttcacctaaatcatcaaagaaaggacttgctcaa
aatggcaaagaagttgcacaaaagaagggaatttcagtagctaaagaaagaaccctcgaa
gctgtggtttatatcttactctcagactctgttgccaaaggacatgttatgctcccctac
tctattcgacacttcataagtgctgatgtacactcatgggtatatattaacacatactca
gctaatatcacgaaggatgagcctttagtgacaatatcttctttaaggttcaagatgcat
gtgaaaggtgcccatggtaacagcgaattagtcactcaggaaggggacacttcgaagata
accagaatttctccggaaaatgatgatttcttccaggaagctcattatggtgaaagcaaa
agtcttcagggtgcagatatcgagagcatttctgagtccgtgtcaaagcagaagtttttt
cttaagcattggcttattggacaacttaaggaaatgtgtttacatgctagccataccgag
ataagttcaatagttttaccagccaatgttgtgctccattttgaggtggcacataaaaaa
ccaaacagaggagttgaattactatacctgctcacatttacttctgaaaactctagtttt
gacaatacacaactcaaggttgagactgcttggagcgctccaatcggcaatccagaaaat
gtggaactgcatttcaggaagttggagttaggagagcctgtatcttttggttccataatg
gatagtagtgccactaatggtttcaagttgacacgatcttctttaggatggatggagact
gcaatgtcagatgtgacaaaaagattatctgtgctgttatcgttaactagcctgaggtta
tttaacagactaaagttcccctttcctggacatgttcttgtctatgggcctcgaggttct
gggaaaactgctttgaccagggcatctgcaaaatactttgaagatcataaagagatcttg
gcacacgtaatatacagagattgttccaaacttgccctaggcaaggctaaggagacgagg
caagcaattgaggacagcatttctgaagcgctgcttcattcaccttcgatcatcatattt
gatgatctggacagtgtgatttcggtctcttcagatcctcaagtttctcaatcgtccagt
tcttctgattcactagtaaggtatttggctgacattatggatgactacagggataagact
cgaagtacatgtggatatggacctattgcatttatggcttcagttcaatcacttcagagt
cttcctcaagacttaacctcttctggtagatttgatttccacattgagcttcctgctctt
gcagtccctcagcgcaatgcacttttgaaacatcaagttgaggagcatgagttgcagtgt
tctgaggaagttctgtctgagatagcatcaaaatgtgaaggttatgatgcatatgacttg
gaaattttggttgatagggctgtgcacgctgctgcttctcggtttgttctgccttctaat
gcctctccgaactctgtgaaaccaactttggtgatggaagatttctcaaaggcaatgcac
ggcttccttcctgtcgcaatgcgtgatcttagaaaatatgctcctgatgataaagatggt
ggctgggaagatgttggagggctaaatgaagcagtaactattattaaagaggttcgtgac
ttttttgcaaaggcagctgcagcagcaccttgcctgctattctttgatgaatttgactcc
attgcaccccagcgaggaacccatagtgctggagtttctgatcgtgttgttaatcagttc
ttgacagaactagatggtgtggaaaccttgactggagtatttgtatttgcagctacgagc
aagccacaactaattgatgctgcgctcttgcggccaggaaggtttgatcgtctagtcttt
tgtgattttcctcgatgggatgaacgtttggaaattctgaaggtgcattctaggacggtt
tcactggcaagtgatgccagtctggaagatgttgcttctctgaccaaaggatttactggt
gctgatcttgctgctattctaacggatgctgggttggcagcagttcatgaacttttggac
aaccaagggaacgggatcccagaaagagaaccatgcatcagcaaagaacttctcatgtct
gtcactaggaaggctagaccttctacacctgcagacgagaagaggcggtatgatagggag
tttggtgaatttgtgtcatccaggaagtctatttccacaaaggcaagagagtcgaaaggc
aaaaaagtcacactagcttga
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integrated database retrieval system
