Panicum virgatum (switchgrass): 120713935
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Entry
120713935 CDS
T07260
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 1-like
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120713935
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120713935
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GFIT
Motif
Pfam:
BACK_BPM_SPOP
BTB
MATH_2
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
120713935
NCBI-ProteinID:
XP_039855823
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Position
6K:complement(13478759..13480261)
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AA seq
356 aa
AA seq
DB search
MTAPTTVSTCTAVTEQGKHVFEIFDYSKHRGIGNGEFIMSGTFSVGGFDWAIRFYPDGFH
TASMNYISVYLELLSKDTRARASCDLSLVDQTTGLPTSVSKTDLRVFNSGDLSRFSPQTA
SFMQRGVFEASPYLRDDHLTIQCITTVRRGPHVSAPVLLNEIEVPPSNIGEHLWNFLDAE
EGVDVRFIVGGETFAAHKLVLAMRSPVFKARLFGRMREAKEQLVTIEEMQPEVFRALLHF
IYTDSLPDMDALDGDVEREMIQHLLVAADRYAVDRLKLVCQSILRKNIDVETVSATMALA
YQHNCDRLKDICLEFITSSSSVMDSVVATQGYKNLKTTCPSALVDLFEKSRKLHKA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgacggctcccacgacagtgtcgacgtgcaccgcggtgacggagcaaggcaaacatgtc
ttcgagatctttgattacagcaagcatcggggtataggtaacggggagttcatcatgtca
ggaacattctccgtcggtggattcgactgggccatccgcttctaccccgacggattccac
acggccagcatgaattacatctcagtttacctcgagctcctgagcaaggacaccagagcg
cgggccagctgcgacctgagcctggtcgaccagaccaccgggctgccgacgtcagtgagc
aagacggatctgagggtgttcaattccggtgatcttagcagattttctccacagactgcc
tctttcatgcagcggggcgtgttcgaagcatcgccgtaccttcgggatgatcacctcacc
atccaatgcattacaactgtaaggagaggaccacatgtatctgcgcctgtgttactgaat
gaaattgaggtcccgccatccaacataggggagcatctttggaactttttggatgcagag
gagggagtggatgtcagattcattgttgggggagagacatttgcagcgcacaagctggtg
cttgcgatgaggtcaccagttttcaaagcgcggctgtttgggcgaatgagggaggcgaag
gaacagctagtgaccatcgaagagatgcaaccggaagtttttagagccctgctgcatttc
atctataccgattctttacctgacatggatgctctggatggagatgtcgagagagaaatg
atccagcatttgctcgtggctgctgatagatatgctgtcgacaggctcaaattggtatgc
caaagcattcttcgtaagaatattgatgtggagactgtatcagctacaatggcattggct
tatcagcataactgcgacaggcttaaagatatttgcctagagtttatcaccagctcatca
agtgtgatggattcagtggtagcaacccaaggttataagaatctgaagacaacctgccct
tctgcactagtagatttatttgagaagtcaaggaagctacataaagcataa
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