Prionailurus viverrinus (fishing cat): 125146492
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Entry
125146492 CDS
T09889
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM22-like
KO
K11999
tripartite motif-containing protein 6/22/34
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pviv04121
]
125146492
Ubiquitin system [BR:
pviv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125146492
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_2
CENP-F_leu_zip
zf-RING_6
TRAF3_RING
DUF3209
TMPIT
RING_XB3-XBAT31
AAA_9
Motif
Other DBs
NCBI-GeneID:
125146492
NCBI-ProteinID:
XP_047679182
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Position
D1:62458710..62471197
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AA seq
512 aa
AA seq
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MDDSIRETGAEATSGIQVSLGNEFEGMGKALCGTEGLDLLELLTEPLSLDCGHTFCXDCI
TAKNRDSXQGGESNCPVCQCKYQLQNLXPNHPLAGIVERVRENRSPQKKKFCENHGKTLC
VFCKEHGKAGCQHTAVSQEYHGHHIFLTEKVVKECQEKLQATLKKLRKEQQKVEELEVDI
REERDSWKNHMQTERQRILKEFNEMKGLLDSKEKRVLQKLEEDKVNVLDNLVVARDQLDW
QRQYLRGLISHIEHQIWGSSEDMLQDLINVMKRSESWILKRPNIVSKKPKSTYQIPDLKG
TLQVFKELTEVQRYWVDVMLKPVNAILNITISADKRQVKGIQDFSLQNIHLCSLSLFDVL
GCQHFSEGKYYWEVDVSEKIAWILGVHSKARSPKRKGSSGFVFDPNVYLPDVYSRYNPQF
GYWVIGLQNESGYNVFEESSTFDPKVLTLCMTVPPHIGVFLDYEAGIVSFFNIANHGSLI
SEFSRCQFFQTTYPYFNPWNCPVSIILCPPSS
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggatgacagtatcagggagactggtgcagaagctacttctggaatccaggtgtctctg
gggaacgaatttgagggcatggggaaggctctatgtgggacagagggacttgacctactg
gagcttctgacagagcccctgagcctggactgtggccacaccttctgctgagattgcatc
actgcaaagaacagggactcannccaaggaggggagagcaactgtcctgtgtgccagtgc
aaatatcagcttcagaatctctgacctaaccaccctctggccggcattgtggagagagtc
agggaaaataggagcccacagaagaaaaagttctgtgagaatcatggaaaaacactctgt
gtcttctgtaaggagcatgggaaggctggttgccagcatactgcagtgtctcaggagtat
cacggtcatcatatattcctcacagagaaggtggtcaaggaatgtcaggagaaactccag
gcaactctgaagaagctgaggaaggagcagcagaaagtagaagagcttgaagttgacatc
agagaggagagagattcctggaagaatcatatgcagactgagagacaaaggattctgaaa
gagtttaatgaaatgaaaggcctcctggacagcaaggagaaaagggtgttgcaaaagctg
gaggaagacaaagtaaatgtgttggataacttggtagtggccagagaccagctggactgg
cagaggcagtacttgagagggctcatctcacacattgagcatcagatatgggggtcctca
gaagacatgctgcaggatttgattaatgtcatgaaaaggagtgagagctggattttgaag
aggccaaacattgtttccaagaaaccgaagagtacataccaaattccagatctgaaaggg
acgctgcaagtgtttaaagagctgacagaagttcaacgctactgggtggacgtgatgctg
aagccagtcaatgctattttgaatattaccatttctgcagataaaagacaggtaaaaggc
atacaagatttctctcttcaaaatatacatctatgtagtctctctctttttgatgtcttg
ggttgccagcatttctccgaagggaagtattactgggaagtagatgtgtctgagaagatc
gcctggatcctgggggtgcacagtaaagcaagaagccccaagagaaaggggagttctggg
tttgtttttgacccgaatgtatatcttccagatgtttactccagatacaaccctcaattt
ggctactgggttattgggttacagaatgaatctggttataacgtttttgaggagtcttcc
acctttgatcccaaggtcttgactctttgcatgactgtccctccccatattggggttttc
ctagactatgaagcaggcattgtctcatttttcaatatcgcaaaccatgggtcactcatc
tccgagttttctagatgtcagttttttcagactacttatccatattttaatccttggaat
tgtccagtctccatcatcctgtgcccaccaagctcctga
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integrated database retrieval system
