Prionailurus viverrinus (fishing cat): 125147875
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Entry
125147875 CDS
T09889
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
125147875 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pviv03036
]
125147875 (ERCC6)
03400 DNA repair and recombination proteins [BR:
pviv03400
]
125147875 (ERCC6)
Chromosome and associated proteins [BR:
pviv03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
125147875 (ERCC6)
DNA repair and recombination proteins [BR:
pviv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
125147875 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
125147875
NCBI-ProteinID:
XP_047681200
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All DBs
Position
D2:complement(47820771..47900702)
Genome browser
AA seq
1484 aa
AA seq
DB search
MQNAGIPHSSQAQEQDCLQSQCVSDKQEMTIKRENDGNAEVEESLPSRSSASGPSTSAEG
CSSEVLRRGPALLHIDRHQIQTVELSAQALELQGLGVDVYDQDVLEQGVLRQVDSAIHEA
SRAAQLADAEKEYRSVLDDLTSCRTSLRQINKIIEQLSPQAATNRDVNRKLDSVKRQKYN
KEQQLKKITAKQKRLQAILGGAEVQVEIDHAGLEEEDTEPGPSCLGSMLMPVQEAAWEEL
IRTGQMTPFGTQIPQKQEKKPRKLMLDEASGFEKYLADQAKLSFERKKQACNKRAARKTA
ASGTSELSATLSENKPSERSKVLSKADKRLRKHIKKLQKRALHFQGKVGLPKGKKPLESD
VRPKAEGTSESEESEYFPTEEEQEEAEGAELTGEGPDSVLKPVLKHRKRQKKVTVQEMGD
DFFPSSGEEAEATCGGGGRKVVRCRDDGDEDYYKQRLRRWNKLRLRDKEKCLKLEGDSEE
SDAEFDDFKIPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGL
SYSKIRTRGSNYRFKGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEK
LIRDIAHCHGILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPH
RIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYK
CACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTEEQLKVYQNFIDSKEVYRIL
NGDMQIFSGLVALRKICNHPDLFSGGPKNLRGIPDEELEEDQFGYWKRSGKMIVVESLLK
IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLITRYNEDTSIFV
FLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIE
EKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLTSPDASQSTETSAIFAGTGSDV
QTPKRLLKRKLLPAFGTDPNVSICKKCPDSNASANDATSSEEKSTATGAEVNAVTSDQVT
SDPLKDAPRMPRDLTGGDGPGEEASAVPRPEESSVISGHGECSDSPGISKMDGLSSEESI
HEKQGLSDKRESCQAPTDPLQENKQTENNFYKHKSKTKHSAPEEETLEHHRRLKQKPKNS
KHRRDAKFEGTRIPHLVKKRRYQKQDSENENETSQQSNDDYVLEKLFKKSVGVHSVMKHD
AIIDGANPDYVLVEAEANRVAQDALKALRLSRQRCLGAVSGVPTWTGHRGVSGAPAGIKS
RFGQKRNSNFSLQHPSSTSSKEKCQDGVTRKDGKDNASEHFSGKVEDAESSPGALPSSSL
LAKMRARNHLILPERLESDSTHQEASAPPSATTEHDDLLVEMRNFIAFQAHVDGQASTRE
ILQEFECKLSASQSCVFRELLRNLCTFHRTSSGEGIWKLKPEYC
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatgcaggaatcccccactcaagccaagctcaggagcaagactgtttacaaagt
cagtgtgtcagtgataaacaagaaatgacaatcaaacgagaaaatgacggcaatgcagag
gtggaggaaagcctcccctctcgttcctctgccagcggaccatccacttctgccgagggc
tgttcatcagaagttctgaggagagggccagccctgctgcacatcgacagacatcagata
cagacggtggagctgagtgcgcaggctcttgagctgcaggggttgggtgtggatgtgtat
gaccaggacgtgctggaacagggtgtgcttcggcaggtggacagcgccattcatgaggcc
agccgtgcggcccaacttgctgatgcagagaaagagtatcgctcagtcctggatgacctc
acgtcatgtaggacatccctaaggcaaatcaataaaattattgaacaacttagccctcaa
gctgccaccaacagagatgtcaacaggaaactagattctgtaaaacgacagaagtataat
aaggaacaacagttaaagaagatcaccgcaaaacaaaaacgtctccaggccatccttgga
ggagcagaggtacaagttgaaatagatcatgctggtctggaggaagaggatacagaaccg
gggccatcctgtctcggcagcatgctcatgcctgtccaggaggctgcttgggaagagctc
atccgcactggccagatgacaccttttggaacccagatccctcagaaacaggagaaaaag
cctagaaaactaatgctcgatgaagcatcaggctttgaaaagtatttggcagatcaagca
aaattgtcttttgaaaggaagaagcaagcttgtaataaaagagcagctaggaaaactgcg
gcctcgggcacctctgagctgagcgcaacactcagtgaaaacaaaccaagtgagcgaagc
aaagttctctcgaaagcagataagcgcttgagaaagcacatcaagaagctgcagaaaagg
gctcttcatttccaagggaaagtgggcttgccgaaaggaaagaagcctttggagtctgac
gtgaggccgaaggcagagggcacctctgagagcgaagagtccgaatacttccccacggag
gaggagcaggaggaggcagagggggctgagctgactggagaaggccctgactccgtgctg
aaacctgtgctcaagcaccggaagcggcagaaaaaagtcacggtgcaggagatgggggat
gacttttttccaagttctggggaagaagcagaagccacctgtggaggaggaggtcggaaa
gtagtgagatgccgagatgatggagatgaagattattataagcagcggctaaggagatgg
aataagctgaggctgcgggacaaagagaagtgtctgaagcttgaaggcgattctgaggag
agcgatgccgagtttgacgattttaaaatcccgggttttctgttcaaaaaactttttaag
taccagcagacaggtgttaggtggctgtgggaattgcactgccagcaggcaggaggaatt
ctgggagatgaaatgggattgggcaagaccatccagataattgccttcttggcaggtctg
agctacagcaagatcaggactcgtggttcaaattacaggttcaaggggttgggcccgact
ataattgtctgtccaacgacagtgatgcatcagtgggtgaaggaatttcacacgtggtgg
cctccgttcagagtggcaattctgcatgaaactggctcttacactcacaaaaaggagaaa
ctaattcgagatattgctcattgtcatggcattttgatcacttcttactcctacattcgg
ctgatgcaagatgacattagcaggcatgactggcactatgtgatattggatgaggggcac
aaaattcgaaatccaaatgctgctgtcacccttgcttgcaaacagttccgcacccctcat
cgcatcatcttgtccggctcaccgatgcaaaataacctccgggagctgtggtcactcttt
gacttcatcttcccaggaaagttaggcacgttgcccgtgttcatggagcagttctcggtt
cctatcaccatggggggatattcaaatgcctccccagtacaggttaaaactgcttataaa
tgtgcatgtgtcttacgagataccataaatccatacctactgcggagaatgaagtcagat
gtcaaaatgagcctttctttgcctgataaaaatgaacaggtcctattttgccgtcttaca
gaggagcaacttaaagtctaccaaaattttattgattccaaagaagtttacagaattctt
aatggagatatgcagattttctctggacttgtagctctgagaaaaatctgcaaccaccct
gatctcttttctggaggccccaagaatctcagaggtattccagatgaggaactagaagaa
gatcagtttggatactggaaacgttctgggaaaatgatagtagttgagtccttgttgaaa
atatggcacaaacaaggtcaacgagtattgctattttcgcagtcaagacaaatgttggac
atacttgaagtattccttagagcccaaaagtattcttacctcaagatggatggtaccact
gcaatagcttcaagacaaccactgattacaagatacaacgaggacacatctatatttgtg
tttcttctgaccactcgggtgggtggcataggagtcaacctgacgggggcaaacagagtc
atcatctatgatcccgactggaacccaagtacagacacacaggcccgggagcgagcctgg
aggatcggccagaagaagcaagtgacggtgtataggctgctgactgcaggcaccatcgaa
gaaaagatttaccaccgacaaattttcaagcagtttttgacaaatagagtgctgaaagat
ccgaagcaaaggcgatttttcaagtccaatgatctttatgagctgttcactctgacaagc
cccgatgcatcccagagcactgaaacaagtgctatttttgcaggaactggttcagatgtt
cagactcccaaacgccttttaaaaagaaaacttctgccagcctttggaacagaccctaat
gtttcaatatgcaaaaagtgccctgattctaatgcatctgcaaatgatgccacatcatct
gaagagaagtctacagcgacaggagctgaagtaaatgcagtaacatctgatcaagtaaca
tctgatcctttgaaagatgcccctcgaatgcctagagatctgactggtggtgatgggcct
ggagaagaggcgagtgcagtgcctagaccagaggagtcatcagtgattagtggacatggg
gaatgttcagattctccaggaatcagcaaaatggatggactgtctagtgaagaaagcatc
catgaaaaacaaggtctttctgacaaaagagaaagctgccaggctccaacagaccctctt
caggagaataagcaaacggaaaataatttttataagcacaagtctaaaacaaaacatagt
gccccagaagaagagaccctggagcaccatcgcaggctgaagcaaaagcctaagaactct
aagcatcgcagagatgccaagtttgaaggaactcgaattccacacctagtgaagaaaagg
cggtaccagaagcaagacagtgaaaatgagaatgagaccagccagcagagcaatgacgat
tatgtcttggaaaagcttttcaaaaagtcagttggtgtgcacagtgtcatgaaacacgat
gccatcatagatggggccaatccagattatgtgctggtggaggcagaggccaaccgagtg
gcccaggacgccctgaaagcgctgaggctctctcgtcaacggtgtctgggagcagtgtcc
ggtgttcccacctggacaggccatcggggggtttctggtgcaccagcaggaataaagagt
agatttggtcagaaaaggaattccaacttctctctgcagcatccttcttcaacatcttca
aaggagaaatgccaggacggcgtcacgagaaaggatggaaaggataatgcttctgagcac
ttcagtggaaaagtggaagatgcagagtcttcacccggggccctcccttcgtcttcactg
ttggctaaaatgagagctaggaaccacctgattctgccagagcgactggaaagtgacagt
acgcaccaagaggcatctgctccgccatctgccaccacggaacacgatgatctgctggtg
gaaatgagaaacttcattgcttttcaggcccatgttgatggccaggccagcactcgggag
atcctgcaggagttcgagtgcaagttatcagcctcacagtcttgtgtctttcgagaacta
ttgagaaatctgtgcacttttcataggacttctagtggtgaaggaatttggaaactcaag
ccagaatactgctga
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integrated database retrieval system
