Prionailurus viverrinus (fishing cat): 125148378
Help
Entry
125148378 CDS
T09889
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125148378 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pviv03021
]
125148378 (TAF5)
03036 Chromosome and associated proteins [BR:
pviv03036
]
125148378 (TAF5)
Transcription machinery [BR:
pviv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125148378 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
125148378 (TAF5)
Chromosome and associated proteins [BR:
pviv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
125148378 (TAF5)
STAGA complex
125148378 (TAF5)
TFTC complex
125148378 (TAF5)
SAGA complex
125148378 (TAF5)
SLIK complex
125148378 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_Gbeta
TFIID_NTD2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Tricorn_2nd
Beta-prop_DCAF12
Beta-prop_Nup120_160
PEP5_VPS11_N
RAB3GAP2_N
CDK5RAP3
Beta-prop_RIG_1st
eIF2A
Cytochrom_D1
Beta-prop_ACSF4
VPS8_N
LisH_PAC1
ABM-like
PROPPIN
Motif
Other DBs
NCBI-GeneID:
125148378
NCBI-ProteinID:
XP_047682379
LinkDB
All DBs
Position
D2:62145688..62160221
Genome browser
AA seq
801 aa
AA seq
DB search
MAALAEEQTEVAVKLEPEGPPTLLPPQAGDGAGEGGGGTTNNGPNGGGGNVAAASSSAGG
DGGTPKPSVAVSAVAPAGAATVPAAAPEAGAPHDRQTLLAVLQFLRQSNLREAEEALRRE
ARLLEEAVAGTGVPGEADGAGAEAASALLSRVTASAPGPAATDPPGTGASGAAAVSGLAT
GPAAPGKVGSVAVEDQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQL
FYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLD
FRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSL
AGEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDP
NAPPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVT
DDSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKIL
YGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYY
FVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNG
NCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRF
SRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTP
VVHLHFTRRNLVLAAGAYSPQ
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcggaggagcagacggaggtggcggtcaagttagagcctgagggaccg
ccgacgctgctacctccgcaggcgggggacggcgctggcgagggtggcggcggcactacc
aacaacggccctaacggcggcggcgggaacgttgcagcggcgtcgtcgtcggccggcggg
gatggtgggacccccaaaccctcggtggctgtctccgccgttgctccggcgggggcggcc
acggtgcccgccgctgctccggaggccggagctccccacgaccgacagactctgctggcc
gtgctgcagttcctgcggcagagcaatctccgcgaggctgaagaggcgctgcgccgtgag
gcccggctgctggaggaggcagtggcgggcaccggagtcccgggagaggcggacggcgcc
ggtgctgaggcggctagcgcgcttctcagccgggtcacagcctcggcccccggccccgct
gccactgaccctccgggcaccggtgcttcgggggccgccgccgtctcgggcttagcgaca
ggtcctgcggctccggggaaagttggaagtgtagctgtagaagaccagccggatgtcagt
gctgtgctctcagcttacaaccaacaaggagaccccacaatgtatgaagaatactatagt
ggactgaaacacttcattgaatgttctttggactgccatcgggcagaattatcccaactc
ttttatcctctgtttgtacacatgtacttggaactagtctacaatcaacatgagaatgaa
gcaaaatcattttttgagaagttccatggagatcaggaatgttattaccaggatgaccta
cgagtattatctagtcttaccaaaaaggaacacatgaaagggaatgagaccatgttggat
tttcgaacaagtaaatttgttctgcgtatttcccgtgactcgtaccaactcttgaagagg
catcttcaggagaaacagaacaatcagatatggaacatagttcaggagcacctctacatt
gacatctttgatgggatgccgcgtagtaagcaacagatagatgcgatggtgggaagtttg
gcaggagaggctaaacgagaggcaaacaagtcaaaggtattttttggcttattaaaagaa
ccagaaattgaggtacctttggatgatgaagatgaagaaggagaaaatgaagaaggaaaa
cctaaaaagaagaaacctaaaaaagatagtattgggtccaaaagcaaaaaacaagatccc
aatgctccacctcaaaacagaatccctcttcctgagttgaaagattcagataagttggat
aagataatgaatatgaaagaaaccaccaaacgagtacgccttgggccagactgtttaccc
tccatttgtttctatacattcctcaatgcttaccagggcctcactgcagtggatgtcact
gatgattctagtttgattgctggaggttttgcagattcaactgttagagtgtggtctgtg
acacccaaaaagcttcgtagtgttaaacaggcagcagatctcagcctcatagacaaggaa
tcagatgatgtcttagaaagaataatggatgagaaaacagcaagtgagttgaagattttg
tatggtcacagcggacctgtctatggagccagctttagtccagataggaactacttgctt
tcttcttcagaggatgggactgttagattgtggagtcttcaaacatttacttgcttggtg
ggatataaaggacacaactacccagtatgggacacacagttttccccatatggctattat
tttgtgtcagggggccatgatcgagtagctcggctctgggctactgaccactatcagcct
ttaaggatatttgctggccatcttgctgatgtgaattgtactagattccatccaaattct
aattatgttgctacgggctctgcagacagaactgtgcgactctgggatgtcctgaatggg
aactgtgtaaggatattcactggacacaagggaccaattcattccttgacattttctccc
aatgggagattcctggctacaggagcaacggatggcagagtactcctttgggatattgga
catggtttgatggttggagaattaaaaggccacactgatacagtttgttcacttaggttt
agtagagatggtgaaattttggcatcaggttcgatggataatacagtccggttatgggat
gctgtcaaagcatttgaagatttagagaccgatgactttactacagccactgggcatata
aatttacctgagaattcacaggagttattgctgggaacatatatgaccaaatcaacgcca
gttgtacacctccattttactcgaagaaacttggttctagctgcaggagcttatagtccg
caataa
DBGET
integrated database retrieval system
