KEGG   Prionailurus viverrinus (fishing cat): 125149068
Entry
125149068         CDS       T09889                                 
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
pviv  Prionailurus viverrinus (fishing cat)
Pathway
pviv03030  DNA replication
pviv03410  Base excision repair
pviv03420  Nucleotide excision repair
pviv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pviv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    125149068 (RFC5)
   03410 Base excision repair
    125149068 (RFC5)
   03420 Nucleotide excision repair
    125149068 (RFC5)
   03430 Mismatch repair
    125149068 (RFC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pviv03032]
    125149068 (RFC5)
   03036 Chromosome and associated proteins [BR:pviv03036]
    125149068 (RFC5)
   03400 DNA repair and recombination proteins [BR:pviv03400]
    125149068 (RFC5)
DNA replication proteins [BR:pviv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    125149068 (RFC5)
  DNA Replication Termination Factors
   ELG1-RFC complex
    125149068 (RFC5)
Chromosome and associated proteins [BR:pviv03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    125149068 (RFC5)
DNA repair and recombination proteins [BR:pviv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     125149068 (RFC5)
  Check point factors
   HRAD17(Rad24)-RFC complex
    125149068 (RFC5)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_24 AAA_16 AAA_11 AAA_22 AAA_assoc_2 RuvB_N AAA_14 DEAD DUF815 ResIII AAA_5 ATPase_2 AAA_19 AAA_30 PhoH nSTAND3 TIP49 AAA_7 TniB DNAX_ATPase_lid AraA_central Mg_chelatase Thioredoxin_6 bpMoxR NPHP3_N AAA_25 AAA_3 ABC_tran AAA_28
Other DBs
NCBI-GeneID: 125149068
NCBI-ProteinID: XP_047683605
LinkDB
Position
D3:14826052..14838550
AA seq 340 aa
METSAKKEQQQPAEAKIRNLPWVEKYRPQTLNDLISHQDILSTIQKFISEDRLPHLLLYG
PPGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFK
LVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPE
LMVPRLEHVVEEEKVDISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTG
HPLKSDIANILDWMLNQDFTTAYRNITELKTLKGLALQDILTEIHLFVHRVDFPSSVRVH
LLTKMADIEYRLSVGTNEKIQLSSLIAAFQVTRDLIVTEA
NT seq 1023 nt   +upstreamnt  +downstreamnt
atggagacctcagcgaagaaggagcagcagcagcccgcggaggccaagatcagaaacctg
ccctgggttgaaaaataccggccacagacactgaatgatctgatttctcatcaggacatt
ttgagtaccattcagaaatttattagcgaagaccgactgccgcacctgcttctctatggt
cctccagggacaggaaagacctctaccatcctagcctgtgctaaacagctgtacaaagat
aaggaatttggctccatggtcttggagctgaatgcttcagacgaccgaggaatagatatc
gttcggggaccaatcctgagctttgccagcacaaggacaatatttaagaaaggcttcaaa
ctagtgatcttggatgaagctgacgccatgactcaagacgcccagaacgccttgaggaga
gtgattgagaaatttaccgaaaatacccgcttttgcctcatctgtaactatctgtcaaag
atcatccccgccttgcagtcccgctgtacgaggttccgattcggtcctctgactcctgaa
ctcatggttccccgcctggaacatgttgtagaagaagagaaggtggacataagtgaggat
gggatgaaagcacttgtgactctttccagcggagatatgcgaagggctctgaacattctg
cagagcaccaatatggcctttgggaaggtgacagaggagaccgtctacacctgcactggg
cacccactcaagtcagacatcgccaacattctggactggatgttgaatcaagacttcacg
acagcctacagaaatattacagagttgaaaacactgaaggggttggcgttacaggacatc
ctgacagagatacacttgtttgtgcacagagttgactttccatcttcagttcgagtacat
ttattgaccaaaatggcagacattgagtacagactttctgttggcaccaacgagaagatt
cagctgagttccctcatagccgctttccaggtcaccagggacctgatcgtcacagaggcc
taa

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