Prionailurus viverrinus (fishing cat): 125149129
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Entry
125149129 CDS
T09889
Symbol
TOP3B
Name
(RefSeq) DNA topoisomerase 3-beta-1 isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03440
Homologous recombination
pviv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125149129 (TOP3B)
03460 Fanconi anemia pathway
125149129 (TOP3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pviv03032
]
125149129 (TOP3B)
03400 DNA repair and recombination proteins [BR:
pviv03400
]
125149129 (TOP3B)
Enzymes [BR:
pviv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
125149129 (TOP3B)
DNA replication proteins [BR:
pviv03032
]
Eukaryotic type
DNA Topoisomerases
125149129 (TOP3B)
DNA repair and recombination proteins [BR:
pviv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
125149129 (TOP3B)
FA (Fanconi anemia) pathway
125149129 (TOP3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
125149129
NCBI-ProteinID:
XP_047683794
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All DBs
Position
D3:complement(31104023..31125778)
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AA seq
862 aa
AA seq
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MRTVLMVAEKPSLAQSIAKILSRGNMSSRKGLNGTCSVHEYTGTFAGQPVRFKMTSVCGH
VMTLDFLGKYNKWDKVDPAELFSQAPTEKKEANPKLNMVKFLQVEGKGCDYIVLWLDCDK
EGENICFEVLDAVLPIMNPTHGGEKTVFRARFSSITDTDICAAMARLGEPDHNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVLQAKVNADKDRSLLLDWDRVRVFDREIAQMFLNMTKLEKEAQVEATSRKEKAKQRPLA
LNTVEMLRVASSSLGMGPQHAMQTAERLYTQGYISYPRTETTHYPENFDLKGPLRQQANH
PYWADTVKRLLTEGINRPRKGHDAGDHPPITPMRSATEAELGSEAWRLYEYITRHFIATV
SYDCKYLQSTISFRIGPEHFTCTGKTVISPGFTEIMPWQSVPLEESLPTCQRGDTFAVSE
IKMLEKQTNPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRRLKPTNL
GIVLVHGYYKIDAELVLPTIRSAVEKQLNLIAQGKADYRQVLGHTLDVFKRKFHYFVDSI
AGMDELMEVSFSPLAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYTLPQNGTIKL
YKELRCPLDDFELVLWSSGSRGKSYPLCPYCANHPPFRDMKKGMGCNECTHPTCQHSLSM
LGIGQCVECESGVLVLDPTSGPKWKVACNKCNVVAHCFENAYRVRVSADTCSTCEAALLA
VDFNKAKSPLPGDETQHTGCVFCDPIFQELVELKHAASCHPMHRGGPGRRQGRGRARGRR
PTVKPSARRPKDKMSALAAYFV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaggaccgtgctcatggttgcagaaaagccatccttggcccagtctattgctaaaatc
ctctctcgaggaaacatgtcctcacgcaaagggctgaacggaacatgctcagtgcacgag
tacacagggactttcgctggccagcccgtccgcttcaagatgacatctgtctgtggtcat
gtgatgaccttggatttcctgggaaagtacaacaagtgggacaaggtggaccctgcagag
ctgttcagccaagccccaacagagaagaaggaagctaaccccaagctgaacatggtgaag
ttcctgcaggtggaaggcaaaggctgcgactacatcgtgctgtggctggactgtgacaag
gaaggggagaacatctgctttgaggtgctggatgccgtgctgcccatcatgaatccaacc
cacggtggcgaaaagacggtgttccgggccagattcagctccatcacggacacggacatc
tgcgccgccatggcccgcctgggcgagcccgaccataacgaggcgctgtcagtggatgcc
cggcaggagctggacctgcgcatcggctgcgcgttcaccaggtttcagactaaatacttc
cagggaaaatatggcaatctagacagctcccttatctcctttggaccatgtcaaacccct
accctgggcttctgtgtggagagacacgataaaatccagtccttcaaaccagagacctac
tgggtgctacaggccaaggttaatgccgataaagacagatctcttcttttggactgggac
cgagtgcgagtgtttgaccgggaaatcgcacagatgtttttaaacatgacaaagctggag
aaggaagcccaggtggaggccacaagccggaaagagaaggccaagcagaggccccttgcc
ctgaacactgtggagatgctgcgagtagctagctcttctctgggcatggggccacaacat
gccatgcagactgccgagcggctctacacgcaaggctacatcagctacccgcggactgag
accacccactaccctgagaactttgatctgaagggccctctgcggcagcaggccaaccac
ccctactgggccgacacggtgaagcggttgttaacagaaggtatcaaccgcccacggaaa
ggccatgatgctggtgaccatccccccattacccccatgaggtctgccacagaggctgaa
ttaggcagtgaggcgtggcggctctatgagtacatcaccagacatttcattgccacagtt
agctacgactgcaagtacctccagagcaccatttccttccgtattggtcctgagcacttc
acctgcacagggaagaccgtcatctctccaggcttcacggagatcatgccctggcagagt
gtgcctctggaggagagcctgcccacctgccagaggggcgacacttttgctgtgagtgaa
ataaagatgctggagaagcagacgaacccacccgactacctgacagaggccgagctcatc
acactcatggagaagcacggcattgggacagacgccagcatccccgtgcacatcaacaac
atctgccagcgcaactacgtcactgtggagagcgggcgccgactcaaacccaccaacctt
ggcatcgtcctggtgcatggctactacaagattgatgcagagctggtgctccccaccatc
cgcagtgcagtcgagaagcagctgaacctgatcgcccagggcaaagctgactaccgccaa
gtcctgggccacaccctggatgtcttcaagaggaagttccactacttcgtggactccatc
gccggcatggacgaactgatggaggtgtctttttcacccctggcggccacgggcaagccc
ctctcccgctgtgggaagtgccaccggttcatgaagtacattcaggccaagcccagccgc
ctgcactgctcccactgcgacgagacctacaccctcccccagaatggcaccatcaagctc
tacaaggagctccggtgcccactggatgacttcgagctggtcctgtggtcctcaggctct
aggggcaagagctacccactgtgcccctattgcgccaatcacccgcccttccgagacatg
aagaaaggcatgggctgcaacgagtgcacacaccccacctgccagcactcgcttagcatg
ctgggcatcggccagtgcgtggaatgcgagagcggcgtgctggtgctggaccccacctca
ggccccaagtggaaggtggcctgcaacaagtgcaatgtggtggcgcactgcttcgagaac
gcctaccgcgtgcgggtgtctgccgacacctgcagcacctgtgaggctgccctgctggct
gtggacttcaacaaggccaagtccccgctcccaggcgacgagacacagcacacgggctgc
gtcttctgcgaccccatcttccaagagctagtggagctgaagcacgcggcctcctgccac
cccatgcaccgtggtgggccaggaaggaggcagggccgggggcgggcccggggccgtcgg
cccacagtgaagcccagtgccaggcggccaaaggacaagatgtcagccctggctgcctac
tttgtatga
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