Prionailurus viverrinus (fishing cat): 125149215
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Entry
125149215 CDS
T09889
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform X1
KO
K23625
ataxin 2/2L
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv05014
Amyotrophic lateral sclerosis
pviv05017
Spinocerebellar ataxia
pviv05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125149215 (ATXN2)
05017 Spinocerebellar ataxia
125149215 (ATXN2)
05022 Pathways of neurodegeneration - multiple diseases
125149215 (ATXN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pviv03019
]
125149215 (ATXN2)
Messenger RNA biogenesis [BR:
pviv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
125149215 (ATXN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
LSM
Motif
Other DBs
NCBI-GeneID:
125149215
NCBI-ProteinID:
XP_047683990
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Position
D3:complement(9450861..9578634)
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AA seq
1141 aa
AA seq
DB search
MSLKPQQQQQQQQQQQPPAAANARKPGGSGGLLTSPATAPSPSSISSSSAVASSSSVAAA
SAGGGRPGLGRGRNSKGLPQSTISFDGIYANMRMVHILTSVVGSKCEVQVKNGGIYEGVF
KTYSPKCDLVLDAAHEKSMESSSGPKREEIMESILFKCSDFVVVQFKDMDSSYARRDAFT
DSAISAKVNGEHKEKDLEPWDAGELTTSEELEALENDVSNGWDPNDMFRYNEENYGVVST
YDSSLSSYTVPLERDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEEKYTAV
QRNSSEREGHGINTRENKYIPPGQRNREVISWGSGRQNSPRMGQPGSGSMPSRSTSHTSD
FNPNSGSDQRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSR
PPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEFVSHTP
PSEAAAPPAARTSPAGGTWSSVVSGVPRLSPKTHRPRSPRQNSIGNTPPGPVLGSPQAGI
IPAEAVAMPVPAASPTPASPASNRAVTPSIEAKDSRLQDQRQNSPAGNKENMKPSETSPS
FSKTENKGISPIVSEHRKQIDDLKKFKNDFRLQPSSTSESMDQLLNKNREGEKSRDLVKD
KIEPNAKDSFVENSSSNCTSGSSKPSSPSISPSVLSNAEHKRGPEVTSQGVQTSSPGCKQ
DKDDKEEKKDAAEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMVGHQQP
APVYTQPVCFAPNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAGKVPNMPQQRQDQHH
QSTMMHPASAAGPPIVATPPAYSTQYVAYSPQQFPNQPLVQHVPHYQSQHPHVYSPVIQG
NARMMAPPAHAQPGLVSSSATQYGAHEQTHAMYACPKLPYNKETSPSFYFAISTGSLAQQ
YAHPNATLHPHTPHPQPSATPTGQQQSQHGGSHPAPSPVQHHQHQAAQALHLASPQQQSA
IYHAGLAPTPPSMTPASNTQSPQNSFPTAQQTVFTIHPSHVQPAYTNPPHMAHVPQAHVQ
SGMVPSHPTAHAPMMLMTTQPPGGPQAALAQSALQPIPVSTTAHFPYMTHPSVQAHHQQQ
L
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgaagccccagcagcagcagcagcagcagcagcagcagcagccgcccgcggct
gccaatgcccgtaagcccggtggcagcggcggccttctcacgtcgcccgccaccgcgccg
tcgccgtcctcaatctcgtcgtcttcggcagtggcttcctcctcctcggtggcggcggcg
agcgcaggcggcgggcggcccggcctgggcagaggtcgaaacagcaaaggactgcctcaa
tctacgatttcttttgatggaatctatgcaaatatgaggatggttcatatacttacatca
gttgttggatccaaatgtgaagtacaagtgaaaaacggaggtatatatgaaggagttttt
aaaacctacagtcctaagtgtgatttggtacttgatgctgcacatgagaaaagtatggaa
tccagttcggggccaaaacgtgaagaaataatggagagtattttgttcaagtgttcagac
tttgttgtggtacagtttaaagacatggactccagttatgcaagaagagacgcttttacc
gactctgctatcagtgctaaagtgaatggtgaacacaaagagaaggacctggagccctgg
gatgcaggtgaactcactaccagtgaggaactggaggctttggaaaacgacgtatctaat
ggatgggatcccaatgatatgtttcgatataatgaagaaaattatggtgtagtgtctaca
tatgatagcagtttatcttcatatacggtacccttagaaagggataactcagaagaattt
ttaaaacgagaagcaagggcaaaccagttagcagaagaaattgaatcaagtgcccagtac
aaagcccgagtggccctggaaaatgatgataggagtgaagaagaaaaatacacagcagtt
cagagaaattcgagtgaacgtgagggccacggcataaacactagggaaaataaatatatt
cctcctggacaaagaaacagagaagtcatatcctggggaagtgggagacagaattcaccg
cgtatgggccagcctggatcgggctccatgccgtcaagatccacctctcacacttcagat
ttcaacccgaattctggttcagaccaaagagtagttaatggaggtgttccctggccatcg
ccttgcccatctccttcctctcgcccaccttctcgctaccagtcaggtcccaactctctt
ccacctcgggcagccacccctacacggccgccctccaggcccccctcgcggccatccaga
cccccgtctcacccctctgctcatggttctccagctcctgtctctactatgcctaaacgc
atgtcttcagaagggcctccgaggatgtccccaaaggcccagcgacaccctcgaaatcac
agagtttctgctgggaggggttccatttccagtggcctagaatttgtatcccatactcca
ccaagtgaagcagctgctcctccagcagcaaggaccagtcctgcggggggcacatggtca
tcagtggtcagcggggttccaagattatcccctaaaactcacagacccaggtctcccaga
cagaacagtattggaaatactcctcctgggccagttcttggttctccccaagctggtatt
attccagctgaagctgttgctatgcctgttccagctgcatctcccacgcctgccagtcct
gcatccaatagagctgttaccccatctattgaggctaaggattccaggcttcaagatcag
aggcagaattctcctgcagggaataaagaaaatatgaagcccagtgaaacatcacctagc
ttctcaaagactgaaaataaaggtatatccccaattgtttctgaacatagaaaacagatt
gatgacttaaagaagtttaagaatgattttaggttacagccaagttctacttctgaatct
atggatcaactgctaaacaaaaatagagagggagaaaaatcaagagatttggtcaaagac
aaaattgaaccaaatgctaaggattctttcgttgaaaatagcagcagcaattgcaccagt
ggcagcagcaaaccgagcagtcccagcatttccccttcagtcctcagtaatgcggaacac
aagaggggacctgaggtcacatcccaaggggttcagacttccagtccgggatgcaaacaa
gataaagatgataaagaggagaagaaagatgcagctgagcaagtgagaaaatcaacactg
aatcctaatgcaaaggagtttaaccctcgttccttttctcagccaaagccttctaccacc
ccaacttcacctcgtcctcaagcacaacctagcccatctatggtgggtcatcagcagcca
gctccagtttatactcagcctgtctgttttgcaccaaatatgatgtatccagtcccagtg
agcccaggcgtgcaaccattataccctatacctatgacgcccatgccagtgaatcaagcc
aagacatatagagcaggtaaagtaccaaatatgccccaacagcggcaagaccagcatcat
cagagcaccatgatgcacccagcctcagcagcaggcccaccgattgtggccaccccacca
gcttattccacacaatatgttgcctatagtcctcagcagtttccaaatcagcctcttgtt
cagcatgtgccacattatcagtctcagcatcctcatgtctatagtcctgtaatacagggt
aatgctagaatgatggcaccaccagcacatgcccagcctggtttagtgtcttcttcagca
actcagtacggggctcatgagcagacgcatgcgatgtatgcatgccccaaattaccatac
aacaaggagacaagcccttctttctactttgccatttccactggctcccttgctcagcag
tatgcgcaccctaatgctaccctgcacccacatactccacatcctcagccttcagctact
cccaccggacagcagcaaagccaacatggtggaagtcatcctgcacccagtccggttcag
caccatcagcaccaggccgcccaggcgctccatctggccagtccacagcagcagtcagcc
atttaccacgcggggctcgcaccaaccccaccttccatgacccctgcctccaatacgcag
tcgccacagaatagtttcccaacagcacaacagaccgtctttacgattcatccttctcat
gttcagccggcatacaccaatcctccccacatggcccatgtacctcaggctcatgtacag
tcaggaatggttccttctcatccaactgcccatgcgccaatgatgctaatgacgacacag
ccacccggcggtccccaggccgccctcgctcaaagtgcactacagcccattccagtctcg
acaacagcgcatttcccctatatgacgcacccttcagtacaagcccaccaccaacagcag
ttgtaa
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