KEGG   Prionailurus viverrinus (fishing cat): 125149938
Entry
125149938         CDS       T09889                                 
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
pviv  Prionailurus viverrinus (fishing cat)
Pathway
pviv03320  PPAR signaling pathway
pviv04148  Efferocytosis
pviv04151  PI3K-Akt signaling pathway
pviv04659  Th17 cell differentiation
pviv04919  Thyroid hormone signaling pathway
pviv04920  Adipocytokine signaling pathway
pviv04928  Parathyroid hormone synthesis, secretion and action
pviv04932  Non-alcoholic fatty liver disease
pviv04976  Bile secretion
pviv05160  Hepatitis C
pviv05200  Pathways in cancer
pviv05202  Transcriptional misregulation in cancer
pviv05207  Chemical carcinogenesis - receptor activation
pviv05216  Thyroid cancer
pviv05222  Small cell lung cancer
pviv05223  Non-small cell lung cancer
pviv05226  Gastric cancer
pviv05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:pviv00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    125149938 (RXRA)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    125149938 (RXRA)
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    125149938 (RXRA)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    125149938 (RXRA)
   03320 PPAR signaling pathway
    125149938 (RXRA)
   04919 Thyroid hormone signaling pathway
    125149938 (RXRA)
   04928 Parathyroid hormone synthesis, secretion and action
    125149938 (RXRA)
  09154 Digestive system
   04976 Bile secretion
    125149938 (RXRA)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    125149938 (RXRA)
   05202 Transcriptional misregulation in cancer
    125149938 (RXRA)
   05207 Chemical carcinogenesis - receptor activation
    125149938 (RXRA)
  09162 Cancer: specific types
   05226 Gastric cancer
    125149938 (RXRA)
   05216 Thyroid cancer
    125149938 (RXRA)
   05222 Small cell lung cancer
    125149938 (RXRA)
   05223 Non-small cell lung cancer
    125149938 (RXRA)
  09172 Infectious disease: viral
   05160 Hepatitis C
    125149938 (RXRA)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    125149938 (RXRA)
  09167 Endocrine and metabolic disease
   04932 Non-alcoholic fatty liver disease
    125149938 (RXRA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pviv03000]
    125149938 (RXRA)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:pviv03310]
    125149938 (RXRA)
Transcription factors [BR:pviv03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    125149938 (RXRA)
Nuclear receptors [BR:pviv03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   125149938 (RXRA)
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3
Other DBs
NCBI-GeneID: 125149938
NCBI-ProteinID: XP_047685088
LinkDB
Position
D4:92191975..92287541
AA seq 439 aa
MAAPSLHPSLGPGIGSSLGSPGQLHSPISTLSPPINGMGPPFSVISSPMGPHSMSVPTTP
TLGFGTSSPQLSSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGNMASFTKHICAICGDRSS
GKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE
AVQEERQRGKDRNENEVESTSSANEDMPVEKILEAELAVEPKTETYVDANMGLSPNSPND
PVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDG
ILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGL
SNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIG
DTPIDTFLMEMLEAPHQMT
NT seq 1320 nt   +upstreamnt  +downstreamnt
atggccgccccctcgctgcacccctctctggggcctggcatcggctcctcgctcggctcc
cccggccagctgcactcgcccatcagcaccctgagcccgcccatcaacggcatgggccca
ccgttctcggtcatcagctcccccatgggcccccactccatgtcagtgcccaccacgccc
accctgggcttcggcaccagcagcccccagctcagctcgcccatgaaccccgtcagcagc
agcgaggacatcaagcccccgctgggcctcaatggtgtcctcaaagtcccggcccacccc
tcagggaacatggcgtccttcaccaagcacatctgtgccatctgcggggaccgctcctca
ggcaagcactacggggtgtacagctgcgagggctgcaagggcttcttcaagcggacggtg
cgcaaggacctgacctacacctgccgggacaacaaggactgtctgatcgacaagcggcaa
cgcaaccgctgccagtactgccgctaccagaagtgcctggccatgggcatgaagcgcgaa
gccgtgcaggaggagaggcagcggggcaaggaccggaatgagaacgaggtggagtccacc
agcagtgccaacgaggacatgccggtggagaagattctggaggcggagctggccgtcgag
cccaagaccgagacgtacgtggacgcgaacatggggctgagccccaactcgcccaacgac
cccgtcaccaacatctgccaggcagcggacaagcagctctttaccctggtcgagtgggcc
aagcggatcccacacttctcagagctgcccctggacgaccaggtcatcctgctgagggca
ggctggaacgagctgctcatcgcctccttctcccaccggtccatcgccgtgaaggacggg
atcctcctggccaccgggctgcacgtccaccggaacagcgcccacagcgccggggtgggc
gccatctttgatagggtgctgacggagctcgtgtccaagatgcgggacatgcagatggac
aagacggagctgggctgcctgcgcgccatcgtcctcttcaaccccgactccaaggggctc
tcgaacccagcggaggtggaggccctgcgggagaaggtctacgcgtccctggaggcatac
tgcaagcacaaataccctgagcagccaggaaggttcgccaagctgctgctgcgccttccc
gctctgcgctccatcggcctcaagtgcctggaacacctttttttcttcaaactcatcggg
gacacgcccatcgacaccttcctcatggagatgctggaagctccacaccaaatgacttag

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