Prionailurus viverrinus (fishing cat): 125150116
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Entry
125150116 CDS
T09889
Symbol
VLDLR
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv05017
Spinocerebellar ataxia
pviv05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
125150116 (VLDLR)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
125150116 (VLDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pviv04131
]
125150116 (VLDLR)
Membrane trafficking [BR:
pviv04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
125150116 (VLDLR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
EGF
hEGF
DUF4010
Motif
Other DBs
NCBI-GeneID:
125150116
NCBI-ProteinID:
XP_047685452
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All DBs
Position
D4:79341062..79372191
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AA seq
873 aa
AA seq
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MGTSARWALWLLLALCWAPRESRATGAGRKAKCEPSQFQCTNGRCITLLWKCDGDEDCAD
GSDEKNCVKKTCAESDFVCNNGQCVPSRWQCDGDPDCEDGSDESPEQCHMRTCRINEISC
GARSTQCIPVSWRCDGEHDCDSGEDEENCGNITCGPDEFTCSSGRCVSRNFVCNGQDDCS
DGSDELDCAPPTCGAHEFQCSTSSCIPLSWVCDDDADCSDQSDESLEQCGRQPRMHTKCP
ASETQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGI
RDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDIGKVCNQEQDCRDWSDEPLKECHVNEC
LVNNGGCSHICKDLVIGYACDCAAGFELIDKKICGDIDECQNPGICSQICINLKGGYKCE
CSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNTVALDVDIAA
QKLFWADLSQKAIFSASIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVA
TLDGAKRKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQ
WPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWI
DGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPSGKNWCEEDMENGGCEYLCL
PAPQINDHSPKYTCSCPNGYNLEENGRECHSTATTVTYRETKSFNTIESSPTSGLAPGGI
NVTTAVTEVTVPPKGTSAAWAILPLLLLAMAAVGGYLMWRNWQHKNMKSMNFDNPVYLKT
TEEDLSIDIGRHSASVGHTYPAISVVSTDDDLA
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgtccgcgcgctgggcgctctggctgctgctcgcgctgtgctgggcgccccgg
gagagccgcgccaccggagcgggaagaaaagccaaatgtgaaccatcccaattccagtgc
acaaatggccgctgtatcacattgttgtggaaatgtgatggggacgaagactgtgctgac
ggcagcgatgaaaagaactgtgtgaagaagacatgtgccgagtcggactttgtttgcaac
aatggccaatgtgtccccagccggtggcagtgtgacggagatcccgattgtgaagacggc
tctgacgaaagccccgaacagtgccatatgagaacgtgccgcattaatgaaatcagctgt
ggcgcccgctccactcagtgtatccccgtgtcctggagatgtgatggtgaacacgattgt
gacagtggagaagatgaagagaactgtggcaacatcacgtgtggccccgatgagttcacg
tgctccagcggccgctgcgtctccaggaatttcgtgtgcaacggccaggacgactgcagc
gacggcagcgacgagctggactgcgcgcccccgacgtgcggcgcccacgagttccagtgc
agcacgtcctcgtgcatccccctcagctgggtgtgtgacgacgacgccgactgctccgac
cagtccgacgagtccctggagcagtgcggccgccagccgcggatgcacaccaagtgcccc
gccagcgagacccagtgcggctcgggcgagtgcatccacaagaagtggcggtgtgacggg
gaccccgactgcaaagacggcagcgacgaggtcaactgtccttcgcgaacctgccgccct
gaccagtttgagtgtgaggacggaagctgcatccacggcagcaggcagtgcaatggtatc
cgagactgcgtggacggctctgatgaagtcaactgcaaaaacgtcaatcagtgcttgggc
cctggcaagttcaagtgcagaagcggggaatgcatagatatcggtaaagtatgtaaccag
gagcaggactgcagggactggagtgacgagcccctcaaagaatgtcatgtcaacgaatgc
ctggttaataacggtggctgttctcacatctgcaaggaccttgttatagggtacgcgtgt
gactgtgcagctgggtttgaactgatagataagaaaatctgtggagacattgacgaatgc
caaaacccgggaatctgcagccaaatttgtatcaacctaaaaggcggttacaagtgtgaa
tgtagtcgaggatatcagatggatcttgccactggcgtgtgcaaggcagtaggcaaagaa
ccaagtctgatcttcactaatcgaagagacatccggaagattggcttggagaggaaagaa
tacatccaactagttgaacagctaagaaacacagtggctctggatgtggatatcgctgct
cagaagctgttctgggctgatctaagccaaaaggccatcttcagtgcctcaattgatgac
aaggttggtagacatgttaaaatgatcgacaatgtctataatcctgcagccattgctgtt
gattgggtgtacaagaccatctactggacggatgcggcttctaagactatttcagtagct
accctagatggagccaagaggaagttcctgtttaactctgacttgcgggagcctgcctcc
atagctgtggacccactgtctggctttgtttactggtcagactggggagaacccgctaaa
atagaaaaagcgggcatgaatggatttgatagacggcctctggtgacagtggacatccaa
tggcctaatggaattacccttgaccttataaagagccgtctctattggcttgactccaag
ctgcacatgttgtccagcgtggacttgaatggccaagatcgtaggattgtcctcaagtct
ctggagttcctagctcatcctctcgcactaacgatatttgaggatcgtgtctactggatc
gatggggaaaatgaagcagtctatggggccaataaattcactggatcagagctggccact
ctcgttaacaaccttaatgatgcccaagacatcattgtctatcacgaacttgtacagcca
tcaggtaaaaattggtgtgaagaagacatggagaacggaggatgtgaatacctgtgcctg
ccagcaccacaaattaacgatcactctccaaagtacacctgttcctgtcccaatgggtac
aatctagaggaaaacggccgggagtgccacagtactgcaactactgtgacttacagagag
acaaagagtttcaacacaatagaaagttcgccaactagtggactagctcctggagggatc
aatgtgaccacagcggtaacggaggtcactgttcctccgaaaggcacttctgccgcctgg
gccatccttcctctcttgctcttggcaatggcagcggtgggtggctatttgatgtggcgg
aattggcagcacaagaacatgaaaagcatgaactttgacaatcctgtgtacttgaagact
accgaagaggacttgtcaatagacattggcagacacagtgcttctgttggacacacgtac
ccagcaatatcagttgtaagcacagatgatgatctagcttga
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