KEGG   Prionailurus viverrinus (fishing cat): 125150968
Entry
125150968         CDS       T09889                                 
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog isoform X1
  KO
K14004  protein transport protein SEC13
Organism
pviv  Prionailurus viverrinus (fishing cat)
Pathway
pviv03013  Nucleocytoplasmic transport
pviv04141  Protein processing in endoplasmic reticulum
pviv04150  mTOR signaling pathway
pviv05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:pviv00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    125150968 (SEC13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    125150968 (SEC13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    125150968 (SEC13)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    125150968 (SEC13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pviv03019]
    125150968 (SEC13)
   04131 Membrane trafficking [BR:pviv04131]
    125150968 (SEC13)
Messenger RNA biogenesis [BR:pviv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     125150968 (SEC13)
Membrane trafficking [BR:pviv04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    125150968 (SEC13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    125150968 (SEC13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    125150968 (SEC13)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_RIG_2nd WD40_Gbeta EIF3I ANAPC4_WD40 Beta-prop_NOL10_N Beta-prop_WDR90_POC16_2nd Beta-prop_WDR41 Beta-prop_Vps41 Beta-prop_EML NBCH_WD40 MIOS_WD40 PAC11
Other DBs
NCBI-GeneID: 125150968
NCBI-ProteinID: XP_047687448
LinkDB
Position
A2:complement(51156433..51191911)
AA seq 322 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHTGHDSSVNSVCWAPHDYGLIL
ACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIK
KFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV
FIWTCDDISSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCI
SDVNKGQGSVSTSVTEGQQNEQ
NT seq 969 nt   +upstreamnt  +downstreamnt
atggtatcagtaattaacactgtggacacctcccatgaggacatgattcacgatgcccag
atggactactatggcacccgcctggcaacctgctcatcagacaggtccgtgaaaatcttc
gatgtgcgaaatggaggacaaatcctcatcgccgacctcaggggtcacgagggtcctgtg
tggcaagtggcctgggcccaccccatgtatgggaacatcttggcatcgtgctcctatgac
cggaaagtcattatctggaaagaggagaatggcacctgggagaagacacatgagcacaca
ggccacgactcctcagtaaactctgtgtgctgggccccccatgactatggcctaatcctc
gcctgtgggagctcggatggggccatctccctgctgacatacaccggagagggccagtgg
gaagtgaaaaagatcaacaatgctcacactattggctgcaatgctgtcagttgggcccct
gctgttgtacctggaagcctcatagaccagccatcggggcagaagcccaactacatcaag
aagtttgcgtcaggcggctgtgacaacctcattaagctgtggaaggaggaggaggatggc
cagtggaaggaggaacagaagctagaagcacacagtgactgggttcgagatgtggcctgg
gccccctccattggcctgcccaccagcaccatcgccagctgctcccaggatggtcgtgtg
ttcatctggacctgtgatgacatctcgagcaatacgtggtcccccaaactgctgcacaag
ttcaatgatgttgtgtggcatgtgagctggtccatcaccgccaacatcctggctgtctca
ggcggagacaataaggtgaccctgtggaaggagtctgtcgacgggcagtgggtgtgcatc
agtgatgtcaacaagggccaaggttctgtgtccacttccgtcacagagggccagcagaac
gagcagtga

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