Prionailurus viverrinus (fishing cat): 125150995
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Entry
125150995 CDS
T09889
Symbol
RORB
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
125150995 (RORB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pviv03000
]
125150995 (RORB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pviv03310
]
125150995 (RORB)
Transcription factors [BR:
pviv03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125150995 (RORB)
Nuclear receptors [BR:
pviv03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
125150995 (RORB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
125150995
NCBI-ProteinID:
XP_047687489
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Position
D4:complement(71424769..71618210)
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AA seq
459 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQSGEAEALAR
VYSGSISNGLGNLSNEAGGAYANGHVIDLPKSEGYYSVDSGQPSPDQSGLDMTGIKQIKQ
EPIYDLTSVPNLFTYSSFNNGQLAPGITMTEIDRIAQNIIKSHLETCQYTTEELHQLAWQ
THTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCL
EVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIA
LFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVC
NLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCATVCK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcacaaattgaagtgataccatgcaaaatttgtggcgataagtcctccgggatc
cactacggagtcatcacgtgcgaaggctgcaagggattcttcaggaggagccaacaaaac
aatgcctcttactcctgcccaaggcagagaaactgtttaatcgacagaaccaacagaaac
cgttgccaacactgccgactgcagaagtgtcttgccctcgggatgtcgagagatgctgtg
aagttcgggaggatgtccaagaagcagagggacagcctgtacgccgaggtgcagaagcac
cagcagcggctgcaggagcagcggcagcagcagagcggggaggcggaagccctcgccagg
gtctacagcggcagcatcagcaacggcctgggcaacctgagcaacgaggccggcggcgcc
tacgccaacggacacgtcatcgacctgcccaagtccgagggctattacagcgtggattcc
ggccagccgtcccctgatcagtcaggacttgacatgactggaatcaaacagataaagcaa
gaacctatctatgacctcacctccgtacccaacttgtttacctatagctctttcaacaac
gggcagctagcacccgggataacgatgactgaaatcgatcgaattgcacagaacatcatt
aagtcccacctggagacgtgtcagtacaccacggaggagctgcaccagctggcatggcag
acccacacctacgaggaaattaaagcctatcagagcaagtccagggaagcactatggcag
caatgcgccatccagatcactcacgccatccagtatgtggtagagtttgcaaagcggata
acgggcttcatggagctctgtcaaaatgatcagattctacttctgaagtcaggttgcctg
gaagtggtgttagtgagaatgtgccgtgccttcaacccattaaacaacactgttctgttt
gaaggaaaatatggaggaatgcagatgttcaaggccttaggttctgatgacctagtgaat
gaagcatttgactttgcaaagaatttgtgttccttgcagctgactgaggaggagattgct
ttgttctcatctgctgttctgatatctccagaccgagcctggctgatagaaccaaggaag
gtccagaagcttcaggaaaaaatttattttgcacttcaacatgtgattcagaagaatcac
ctggatgacgagaccttggcaaagttaatagccaagataccaaccatcacggcggtctgc
aacttgcacggggagaagctgcaggtatttaaacaatcacatccagacatagtgaataca
ctctttcctccattgtacaaggagctctttaatcctgactgtgccaccgtctgcaaatga
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