Prionailurus viverrinus (fishing cat): 125151147
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Entry
125151147 CDS
T09889
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pviv03019
]
125151147 (HELZ)
Messenger RNA biogenesis [BR:
pviv03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
125151147 (HELZ)
3'-5' decay
Other 3'-5' decay factors
125151147 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
zf-CCCH
UvrD-helicase
AAA_30
ResIII
PhoH
PAM2
zf_CCCH_4
Mov-10_helical
zf-CCCH_4
AAA_22
AAA_16
AAA_7
Bac_DnaA
Mg_chelatase
AAA_5
Motif
Other DBs
NCBI-GeneID:
125151147
NCBI-ProteinID:
XP_047687601
LinkDB
All DBs
Position
E1:39487406..39650375
Genome browser
AA seq
1938 aa
AA seq
DB search
MEDRRAEKSCEQACESLKRQDYEMTLKHCTEALLSLGQYSMADFTGPCPLEIESIKIESL
LYRIASFLQLKNYGQADEDCRHVLGEGLATGDGAFQAVLCCMQLKGKLQPVSNILAKSLT
GESLNGMVTKDLTRLKTLLTETETATSNVLSGYHVEGLEGGSCNGWHFRPPPRGITSSEE
YTLCKRFLEQGICRYGAQCTSAHSQEELAEWQKRYASRLIKLKQQNENKQLSGSYMETLI
EKWMNSLSPEKVLSECIEGVKVEHNPDLSVTVNTKKSHQTWTFALTCKPARMLCRVALLY
DAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKMAQNGLDHYVYKVGIAFNTEIFGT
FRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIIDFEPNE
TTDLEKSLLIRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKFNL
KVQLQILASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVP
KEKLVQTQGTKEKVYEATIEEKTKEYIFLRISRECCEELNLRPDYDTQVELQFQLNRLPL
CEMHYALDRIKDNGVLFPDITMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQ
LPPVLIIGPYGTGKTFTLAQAVKHILQQQETSRILICTHSNSAADLYIKDYLHPYVEAGN
PQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLC
QLDLEPGFFTHILLDEAAQAMECETIMPLALAAKNTRIVLAGDHMQLSPFVYSEFARERN
LHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYP
LTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQ
VFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDS
TEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENNSLHG
ITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRLQHSGNTNKLQQSPPKGKSLHHTQND
HFQNDGIVQPNPSVLIGNPIRAYTPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVY
GGNVVMSVPLPVPWTGYQGRFAVDPRILTHQAAMAYNMNLLQTHGRGSPLPYGLGHHPPV
SIGQPQSQHQEKDQHEPSRNGKSDTNNPGPEISKIRTPEKKPMESKQIDLESNPQNRSPE
SRPGVVYPNTKFHRKDNLNPRHINLPLPAPHAQYAIPNRHFHPLPQLPRPPFPIPQQHAL
LNQQQNNLPEQPNQLPPQPNQVVPPQNPLNQLTQQPPPQLSPAYQAGPNSAFFNSAVSHR
PQSPPAEAVIPEQQPPPMLQEGHSPLRAIAQPGPLLPSHLNNFTDETPPGLPIGEALDRM
HGSVALETLRQQQVRLQQWHEHHAYLSQGSIPYPHRHPHPHLPHLPQPPVRADWKLPSSA
EDEAESADSRFQDLIRELSNRDQSETRELAEMPPPQSRLLQYRQVQSRSPPAAPPPPSST
DHSGHFSNFNDSSRDIEVANNPAFPQRLPPQLFSSPFSLPSEHLAPPPLKYLAPDGAWTF
ANLQQSHLMGPGFPYGLPPLPHRPPQNPFVQIQNHQHAIGQEPFHPLSSRTVSSSSLPSL
EEYEPRGPGRPLYQRRISSSSVQPCSEEVSTPQDSLAQYKELQDHSSQSSFNFSSPESWV
NTTSSTPYQNIPCNGPSRTAQPRELIVPPPKTVKPPEDQLKSESLEVSSSFNYNVLQHLG
QFPPLMPNKQIAESASSSSQQSSGGSKPAMSYASALRAPPKPRPQPEQAKKSSDPLSLFQ
ELSLGSSSGSNGFYSYFK
NT seq
5817 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagaagagctgagaagtcatgtgaacaagcgtgcgaatcacttaagaggcag
gactatgaaatgaccctcaagcactgcacagaggccctcctttctcttggccagtactcc
atggccgacttcacagggccatgtccactggagatagaaagcatcaaaattgagagtctt
ctttacagaatcgcctcgtttttgcaactgaaaaactatgggcaagctgatgaagattgt
aggcatgtgctgggggaaggcctggccactggagatggtgccttccaggcagtgctttgc
tgcatgcagctgaaaggaaagctccagcctgtatccaacattcttgccaagtcgctgaca
ggagagtccctgaatgggatggtaacaaaagatttgacaagactgaaaacacttctcaca
gaaacagagacagcaactagtaacgtcctgtctggatatcacgtggaaggcctggaaggg
ggatcttgtaatggttggcatttccgcccaccacctaggggaatcacaagcagcgaggaa
tatactttgtgtaaaagatttttagaacaaggcatctgtaggtacggtgcccagtgtact
tcagcgcactcccaggaagaactagcagaatggcagaaacgatacgcctcgcggctgata
aaattgaaacagcaaaacgagaataaacagctctcaggcagttacatggagaccttgata
gaaaagtggatgaattcattatctcctgagaaagtgcttagcgaatgtatagagggagtg
aaagttgagcataatcctgatctgtcggttactgtcaacaccaaaaagtctcaccagaca
tggacctttgctcttacttgtaagcctgcaagaatgctgtgtcgggtagcgttgctctat
gatgcacatcgtcctcattttagtatcattgcaatatctgccggagatagtactacccag
gtatcgcaggaagtcccagagaactgtcaagaatggataggagggaagatggcccaaaat
ggattagatcattacgtgtataaagtcgggatagcatttaacacagaaatctttggaact
tttcgccaaaccatagttttcgactttggattggaaccggtactcatgcaaagagtaatg
attgatgcggcttctacagaagatcttgaatacctgatgcatgcaaaacaacagctagta
accacagctaagcgttgggattcttcttctaagactattatagattttgaacctaatgaa
actactgatttggagaagagccttcttatcagataccaaattcctctctctgctgaccag
ctgtttacccagtcggttttagacaaatcattgaccaagaccaactatcagtcacggctg
catgaccttctttatattgaggagatagcccagtataaagaagtcagcaagttcaacctt
aaagtgcaattgcagattctagcaagcttcatgctcacgggagtttctggaggcgcaaag
tatgctcagaatggacaactttttggtcgctttaagcttactgaaacactttctgaagat
actttggctggacggctggtgatgaccaaagtcaatgctgtttatttattaccagtccct
aaagagaagttagtacagacccagggaaccaaagagaaggtttatgaagctactattgaa
gagaaaacaaaagaatatatatttttaaggatatccagggaatgctgtgaagaacttaat
cttcggcctgattatgacacacaggttgaacttcagtttcaattaaatcgattacccctc
tgtgaaatgcattatgcgctagacaggatcaaggacaatggggttttgtttccagacatc
actatgactccaaccataccttggagtcccaacagacagtgggacgaacaattggatcct
cggctgaatgcaaaacagaaagaggctgttctggccatcacaactcctctttcaatccag
ctgcctcccgtcctcatcattggaccctacgggacaggcaaaacgttcactctagctcag
gccgtcaagcacatactccagcagcaggagacgagcaggattctcatttgcacccattct
aatagtgctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaat
ccccaggcaagacctctcagggtatatttcagaaatcgctgggttaagactgtccaccca
gttgtgcatcagtactgtttgatctcaagcgcacattccacctttcagatgccacagaaa
gaagatattcttaaacaccgagtggtggttgttacattgaatacttcccagtacctctgt
cagttggaccttgaacctgggttttttacacacattctgttagacgaagctgcccaggcc
atggagtgtgaaaccattatgcctctagcgttagcagctaaaaatacgcggattgtcttg
gctggtgaccacatgcagctcagtccttttgtttacagcgagtttgccagggagagaaac
cttcatgtgtcattacttgatcgactctatgagcattaccctgctgagtttccgtgtagg
atcctcctgtgtgagaattaccgctcccatgaagctatcatcaattacacctctgagctc
ttctatgagggcaaactgatggccagtggaaagcaaccagcacacaaggatttctaccca
ctaactttctttacagcacgaggggaagatgtacaagaaaaaaacagcacagctttttat
aataatgcagaggtcttcgaagtggtggaacgtgtggaagagttgagacggaagtggccg
gtagcatgggggaagttggatgatggcagtattggcgtggtgactccgtacgctgatcaa
gtgtttaggatacgtgctgaacttcggaaaaagagattatctgatgttaatgtagaaagg
gtgctaaatgttcaaggaaagcagttcagagttctgtttcttagcacagtacgtacaagg
catacttgtaaacacaaacagacaccaattaaaaagaaagagcaactgctggaagattcc
acagaggatttagattatggttttttatctaactacaagcttctcaatactgccatcaca
agagcacaatctctggttgctgtggtgggtgatcccatcgccctgtgctctatcggaaga
tgcaggaaattttgggagcggtttattgccctgtgtcacgaaaataatagcctacacgga
atcacttttgaacagatcaaagctcagctagaggctctggaactcaagaagacgtacgtg
ttgaatccactggcacctgaatttatcccccgggctctaagactgcagcattcaggaaat
accaacaaactgcagcagtcaccccccaaggggaaaagcctccatcatacccagaatgat
catttccagaatgatggaattgttcagcccaatccttctgtacttattggcaatcctatt
agagcatatactcctccacccccccttggacctcacccaaatttggggaaatctccaagc
cctgttcaaagaatagatcctcacactgggacaagtattctttatgtacctgctgtctat
ggagggaatgtagttatgtcggtgcctttacctgtaccatggacagggtaccagggcagg
ttcgcagttgatcctcggatccttacacaccaagcagcgatggcctacaacatgaacctc
ttacagacacacggacgggggtctcccctaccgtatggccttgggcaccacccacccgtc
agcatagggcagccacaaagccagcatcaggagaaggatcaacatgagccaagtcgaaat
ggtaaaagtgatacaaataatcctggacctgaaattagtaagattcgaacaccagagaaa
aagcctatggaatccaaacagattgatttggaatcaaatccacagaacagaagtcctgag
tcgcgtcctggtgtcgtttatcccaataccaaatttcatcgcaaagataatctcaacccg
agacatataaatcttcctctccctgctccccacgcacagtatgcaatccccaatcgtcat
tttcatccccttccccagctaccaagaccaccatttccaattccgcagcagcacgccttg
ttaaatcagcagcagaataatttgcctgaacaaccaaatcagttgccgccccaaccaaat
caggtagtcccgccgcagaatccgttgaatcagctgactcagcagccacctcctcaactt
tcccctgcctatcaggcagggcccaacagcgctttctttaatagtgcggtctctcaccgg
ccccagtcccctcctgcggaggctgtgattcctgagcagcagccccctcccatgctgcag
gaaggccacagccctcttcgggccatcgcacagcccggccccctccttccttcccatctg
aataacttcactgatgagactcccccgggattgccaatcggggaggctttagatcggatg
catgggagtgtagctctggagacgctgaggcagcagcaggtgcggctccagcagtggcat
gagcaccacgcctacctcagtcagggcagcattccgtaccctcaccgccatcctcatcct
cacctcccgcatcttcctcagccgccagtgagagcagactggaagctccccagcagcgcg
gaggacgaagcagaaagcgcagactccaggtttcaagacttaatcagagaactgtctaat
cgtgatcaaagtgaaacacgggaactggctgaaatgccaccacctcaatcaagacttttg
caatatagacaagtgcagagcaggagcccgccagcagccccgcctcccccgtccagcacg
gaccacagtggccacttttctaactttaatgacagtagcagagacatcgaagtagccaac
aacccagcatttccgcagcgcctgccgccccagctcttcagctcaccgttctcattgcca
tccgaacaccttgcccctcctcccttgaaatacctggcgcctgacggagcgtggactttt
gctaacttacaacagagtcacctaatggggccgggttttccctacggcctacctcccttg
cctcacagaccaccgcagaacccttttgtacaaatacagaatcatcaacacgctattggt
caagagccatttcacccactgtcatctcgaacagtatcttcttcttcgctccctagctta
gaagagtatgaacccagaggacctggtcggcccttgtaccaaagaagaatctcatctagc
tcagtccagccttgttctgaagaagtaagcactcctcaagacagtcttgctcagtataaa
gagcttcaggaccatagtagccaatcttctttcaacttttcatccccggagtcctgggta
aacaccacctcatctaccccctatcagaacattccgtgtaatggacccagcaggacagct
caacccagagagttgatagttccaccacccaagaccgtcaaaccccctgaggatcagctg
aagtccgagagcctcgaggtgtccagttccttcaactataatgtgctgcagcatctcggc
cagttccccccactcatgcccaacaagcagatcgcggagtcggccagcagcagtagccag
cagagctcggggggcagcaagcccgccatgtcctacgccagcgctttgcgggcccctccc
aagcccaggccccagcctgagcaggccaagaagagtagcgaccctctgtctctgttccag
gaactcagcctggggagctcatcaggcagcaatggcttttactcctattttaaataa
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integrated database retrieval system
