Prionailurus viverrinus (fishing cat): 125151385
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Entry
125151385 CDS
T09889
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125151385 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pviv03036
]
125151385 (MBD4)
03400 DNA repair and recombination proteins [BR:
pviv03400
]
125151385 (MBD4)
Chromosome and associated proteins [BR:
pviv03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
125151385 (MBD4)
DNA repair and recombination proteins [BR:
pviv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
125151385 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
125151385
NCBI-ProteinID:
XP_047688247
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Position
A2:complement(53562677..53572190)
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AA seq
574 aa
AA seq
DB search
MESPSLRDYRAARSVTSSERLDPDRPSDLRKKDVTLELERVGKDEKQMMIKNSSEWNPLL
QESIASSQIGGSTMTECRKSVPCGWERVVKQRLSGKTAGRYDVYFISPQGLKFRSKSSLA
KYLHKNGETSLTPEDFDFTVPSKRGIKARHKDNNTAPLTSQMQNERSNSNWNLRTRSWWR
KGVFPLSSGTSESQNSRGPSNFKEDEGVNDVDSRKVRKSKRKVTILKGIQIKKTKTGCQK
GLPESTQSNRKRESEYNKADAESEPVEQRSQLDKTFSISDAGASNKTLSVTNEEKRIVKE
KSLSSGSNFCFEQITSGIINKLCSTEEAEHSKKCEETFLESEEIRTKVEAGERKEHLHTD
ILKCGSEMDDNCSQTEKDSISVKICQGIQSAEAAEDTIPRTQIEKRKTSLYFSSKYNKEA
LSPPRRKAFKKWTPPRSPFNLVQETLFHDPWKLLIATIFLNRTSGKMAIPVLWEFLEKYP
SAEVARTADWRDVSELLKPLGLYDLRAKTIIKFSDEYLTKQWRYPIELHGIGKYGNDSYR
IFCVNEWKQVHPEDHKLNKYHDWLWENHEKLSLS
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggagagtccgagcctgcgggactacagagctgcccgctcggtcacttccagtgagcgc
ctagacccagaccggcccagtgacctccgtaagaaagatgttactctggaattggaaaga
gtgggaaaagatgaaaagcaaatgatgataaaaaacagcagtgagtggaatcccctgctg
caagaatccattgcttccagtcagattggtggtagtacaatgacagaatgccgtaagtct
gtcccatgcggatgggaaagagttgtgaagcaaaggttatcagggaaaacagcaggaaga
tatgatgtatattttatcagcccacaaggactgaagttcagatccaaaagttcacttgct
aaatatcttcacaaaaatggagagacttctcttacaccagaagattttgattttactgta
ccttctaaaaggggcatcaaggccagacataaagataacaacacagcgcctctgacatcc
caaatgcaaaatgaaaggagcaattcaaactggaacctcaggacacgaagctggtggaga
aaaggtgtctttcccctgtcaagtggtacttcggaatcgcaaaatagcagaggaccatct
aactttaaagaagatgagggtgttaatgatgttgactccagaaaggttagaaagtccaaa
cgaaaggtgactattttaaaaggaattcaaattaagaaaactaaaacagggtgccagaag
ggtcttcccgagtctactcaaagtaataggaaaagagaatctgaatataataaggcagat
gctgaaagtgaacctgttgagcaaagaagtcagcttgataaaactttctccatttctgat
gctggagcaagcaacaagaccctcagtgtaaccaatgaagaaaagagaattgtaaaagaa
aaatcactgagttcaggatcaaacttttgttttgaacaaataacttctggcatcataaac
aaattatgttcaaccgaagaagcagaacacagcaagaagtgtgaggaaacctttttagaa
tctgaggaaataagaacaaaagtagaagctggggaaaggaaggaacatttgcatactgac
attttaaaatgtggctctgaaatggatgacaactgctcacaaacggagaaagactctatt
tctgtgaaaatatgtcaaggtattcagagcgctgaagcagctgaagataccattccacgg
acacaaatagaaaaaaggaaaacaagcctatatttttccagcaaatataacaaagaagcc
cttagccccccacgacgcaaagcctttaagaagtggacacctcctcggtcaccttttaac
ctcgtccaagaaacacttttccatgatccatggaagctcctcatcgctactatatttctc
aatcggacctcaggtaaaatggcaatccccgtgctctgggagtttctagagaagtaccct
tcagctgaggtagcaagaaccgcagactggagagatgtgtcagaacttcttaaacctctt
ggtctctatgatcttcgagcaaaaaccattatcaagttctcagatgaatatctgacaaag
cagtggaggtacccgattgagcttcacgggattggcaaatatggcaatgattcttaccga
attttttgcgtcaatgagtggaagcaggtgcaccctgaagaccataagttaaataaatat
catgactggctttgggaaaatcatgaaaaattaagtctgtcttaa
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