Prionailurus viverrinus (fishing cat): 125151484
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Entry
125151484 CDS
T09889
Symbol
ABCA5
Name
(RefSeq) cholesterol transporter ABCA5 isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125151484 (ABCA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pviv02000
]
125151484 (ABCA5)
Transporters [BR:
pviv02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
125151484 (ABCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
RsgA_GTPase
AAA_29
AAA_23
Motif
Other DBs
NCBI-GeneID:
125151484
NCBI-ProteinID:
XP_047688528
LinkDB
All DBs
Position
E1:complement(42067956..42139490)
Genome browser
AA seq
1642 aa
AA seq
DB search
MATAIREVGVWRQTRTLLLKNYLIKCRTKKSSVQEILFPLFFLFWLILISMMHPNKKYEE
VPDIELTPMDKSILSNLILGYTPVTNITRNIMQKVSTDHLPDVIITEEYTSEKELLVSSL
SKPNNFVGVVFKDFMSYELRFFPDMIPVSSIYMDSRAGCSTSCEATQYWSSGFTVLQASI
DAAIIQLKTNVSFWKELESTKAVIMGETAMVEIDTFPRGVILIYLVIAFSPFGYFLAIHI
VAEKEKKLKEFLKIMGLHDTAFWLSWVLLYTSLIFLMSLLMAVIATASSLFPQSSCVVIF
LLFFLYGLSSVFFALMLTPLFKKSKHVGIVEFLVTVAFGFVGLLIVLMESFPKSLVWLFS
PFCQCTFLIGIAQVMHLEDFNEGALFSNLTEGPYPLIITLVMLALNSIFYVLLAIYLDQV
IPGEFGLRRSSLYFLKPSYWSKSKRNYKELSEGNVNGNISFSEIVEPVSSEFVGKEAIRI
SGIQKTYRKKGESVEALRNLSFDIYEGQITALLGHSGTGKSTLMNILCGLCPPSDGFASI
YGHRVSEIDEMFEARKMIGICPQLDIHFDVLTVEENLSILASIKGIPANNVIQEVQKVLL
DLDMQAIKDNQAKKLSGGQKRKLSLGIAVLGNPKVLLLDEPTAGMDPCSRHIVWNLLKYR
KFNRVTVFSTHFMDEADILADRKAVISQGMLKCVGSSIFLKSKWGIGYRLSMYIDRYCAT
ESLSSLVKQHIPGATLLQQNDQQLVYSLPFKDMDKFAGLFSALDTHSNLGVISYGVSMTT
LEDVFLKLEVEAEIDQADYSVFTQQPPEEEVDSKSFDEMEQSLLILSEAKASLVSTKSLW
KQQVYTVAKFHLLTLKRESKSARSVLLLLLIFFAVQIFMFLVHRSFKNAVVPIKLVPDLY
FLKPGDKPHKYKTALLLQNSTDSDISDVISFFTNQNIMVTMFNDSDYVSAAPHSAALNVM
YSEQDYVFTAVFNSTMVCSLPVLMNIISNYYLYHLNVTESIQVWNTPFFQEITDIVFKIE
LYFQAALLGIIVTAMPPYFAMENAENHKIKAYTQLKLSGLLPSAYWIGQAIVDIPIFFLV
LILMLGSLFAFHYGLYFYALKFLSVVFCLIGYVPSVILFTYVTSFTFKKILNTKEFWSFI
YSVTALACIAVTEITFFMGYTVTAVLHYTFCMAIPIYPLLGCLICFIKISWKNIRKNEDT
YNPWDRLLVAVISPYLQCVLWIFLLQYYEKKYGGRSIRKDPFFRTLSTKSKNRKSPEPPN
NEDEDEDVKAERLKVKELMSCQCCEEKPAIMVSCLHKEYDDKKDFLLTRKVKKVATKYVS
FCVKKGEILGLLGPNGAGKSTIINILVGDIEPTSGQVFLGDYSSDPTEDDDSIKYMGYCP
QMNPLWPDITLQEHFEIYGAVKGMSTSDVKEIINRITNALDLKEHLQKTVKKLPAGIKRK
LCFALSMLGNPPITLLDEPSTGMDPKAKQHMWRAIRTAFKNKKRAAILTTHYMEEAEAVC
DRVAIMVSGQLRCIGTVQHLKSKFGKGYFLEIKLKEWVENLEVDRLQREIQYIFPNASRQ
ESFSSILAYKIPKEDVPSLAQSFSKLEEAKHTFAIEEYSFSQATLEQVFVELTKEQEEED
NSCGTLNSTLWWERTQEDRVVF
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcaattagggaggtgggagtttggagacagaccagaacactcctgctgaag
aattacctaattaaatgcaggactaaaaaaagtagtgttcaggaaattctttttccactc
ttttttttattttggttaatattaattagcatgatgcatccaaataagaaatatgaagaa
gttcctgatatagaacttacccctatggacaaatctattctctctaacctaattcttgga
tatactccagtgactaatattacaagaaacatcatgcagaaagtgtctactgatcacctt
cctgatgtcataattactgaagagtatacaagtgaaaaagaattgttagtatccagtctt
tctaagcccaacaactttgtaggtgtggttttcaaagacttcatgtcctatgaactccgt
tttttccctgatatgattccagtatcttctatttatatggattcaagagctggctgttca
acatcatgtgaggctactcagtactggtcctcagggttcacagttttacaagcatccata
gatgctgctattatacagctgaagaccaatgtttccttttggaaggagctggagtccact
aaagctgtcattatgggagaaactgctatggttgagatagatacttttccccgaggagtc
attttaatatacctagtaatagcattttcaccttttggttactttttggcaattcatatc
gtagcagaaaaagagaaaaaattaaaggagtttttaaagataatgggacttcatgacact
gccttttggctttcatgggttcttctgtatacaagtttgattttccttatgtcccttctt
atggcagtcattgcaacagcttcttcattattccctcaaagtagctgcgttgtgatattt
ctactttttttcctgtatgggttatcatctgtattttttgctttgatgctgacacctctt
tttaaaaaatcaaaacatgtgggaatagttgaatttttagtcactgtggcttttggattt
gttggccttttgatagtcctcatggaaagttttcccaaatcattagtgtggcttttcagt
cctttctgtcaatgtacttttttgattggtattgcacaggtcatgcacttagaagatttt
aatgaaggtgctttattttctaatttgactgaaggcccatatcctctaattattactctt
gtcatgctagcacttaatagtatattctatgtcctcttggctatctatcttgatcaagtc
attccaggggaatttggcttacggagatcatctttatattttctaaagccatcatattgg
tcaaaaagcaaaagaaattataaggagttatcagagggcaatgttaatggaaatattagt
tttagtgaaattgttgagcctgtttcttcagaatttgtgggaaaagaagccataagaatc
agtggtattcagaagacgtacagaaagaaaggtgaaagcgtggaggctttgagaaatttg
tcattcgacatatatgaaggtcagattactgcattacttggtcacagtggaacaggaaag
agtactttgatgaatattctttgtggactatgcccgccttctgatggatttgcatctata
tatggacacagagtctcagaaatagacgaaatgtttgaagcaagaaaaatgattggcatt
tgtccacagttagatatacactttgatgtgttgacagtagaagaaaacttatccattttg
gcttcaatcaaaggaatcccagccaataatgtaatacaagaagtgcagaaagttctgctg
gatttagacatgcaggctatcaaagataaccaagctaaaaagttaagtggtggtcagaaa
agaaaactgtctttaggaattgctgttcttgggaatccaaaggtactattgctagatgaa
ccaacagctggaatggatccctgttctcgtcatattgtttggaatctcctgaaatacaga
aaatttaatcgggtgacagtgtttagtacccatttcatggatgaagctgacattcttgct
gataggaaagctgtcatatcacaaggaatgttgaaatgtgttggttcttcgatttttctc
aaaagtaaatgggggattggctaccgcctaagcatgtacatagacagatattgtgccaca
gaatctctttcatccctggttaaacaacatatacctggagctactttattacaacagaat
gatcaacaacttgtgtatagcttgccttttaaggacatggacaaatttgcaggtttattt
tctgctctagacactcattcaaatttgggtgttatttcttatggtgtctccatgacaact
ttggaagatgtgttcttaaagctagaagttgaagcagaaattgaccaagcagattatagt
gtatttactcagcagccaccagaggaggaagtggattcaaaatcttttgacgaaatggag
cagagcttacttattctttccgaagcaaaggcttctctagtgagcaccaagagcctttgg
aaacagcaggtgtacacggtagcaaagtttcatttgcttactttgaaacgggaaagcaaa
tcagcgagatcagtgttgcttctgcttttaattttttttgcagttcagatttttatgttt
ttggtgcatcgctcttttaaaaatgctgtggttcccatcaaacttgttccagacctatat
ttcctaaaacctggagataaacctcataaatacaaaacagctctgcttcttcaaaattct
actgactccgatatcagcgatgttattagctttttcacaaaccagaacataatggtgaca
atgtttaatgacagtgactatgtgtccgctgctccccatagtgcagctttaaatgtgatg
tattcagaacaggactatgtttttacagctgttttcaacagtactatggtttgttcttta
cctgtattgatgaatattattagtaattattatctttaccatttaaatgtgactgaaagc
atccaggtttggaatactccattctttcaagaaattacagacatcgtttttaaaatcgag
ctgtatttccaagcagctttgcttggaatcattgtgactgcaatgccaccttactttgcc
atggaaaatgcagagaatcataagatcaaagcttatactcaacttaaactttcagggctt
ttaccgtctgcatattggattggacaagctattgttgatatccccatattttttcttgtt
cttattttgatgctaggaagtttatttgcattccattatggattatatttttatgctcta
aagttcctttctgtggttttttgccttattggttatgttccatcagtcattctgtttacc
tatgttacttctttcactttcaaaaaaattttgaataccaaagagttttggtcatttatt
tattctgtgacagcattggcttgcattgcagtcaccgaaatcacgttctttatgggatac
acagttacggctgttctccattataccttttgtatggccattccaatctatccacttcta
ggttgtctgatttgtttcataaagatttcttggaagaatattcgaaaaaacgaggacacg
tataatccatgggatagacttttggtggcagttatatcgccttacctgcagtgtgtactg
tggattttcctcttacagtactacgagaaaaaatacggaggcaggtcgatacgaaaggat
ccctttttcaggaccctttcaacaaagtccaaaaataggaagtctccagaaccaccaaac
aatgaggatgaagatgaagatgtcaaagctgaaagactgaaggtcaaagagctaatgagt
tgccagtgttgtgaggagaaaccagccattatggtcagctgtttgcataaagaatatgat
gacaagaaagattttcttcttacaagaaaagtaaagaaagtagcaactaaatatgtctct
ttctgtgtgaaaaaaggagagatcttggggctactgggtccaaacggtgcaggcaaaagc
acaattatcaatattctggttggtgacattgaaccaacttcaggccaggtatttctagga
gattattcttcagacccaactgaagatgacgattccattaagtatatgggatactgtcct
cagatgaacccactgtggccagacattacattgcaggaacattttgaaatttacggagct
gtaaaaggaatgagcacgagtgacgtgaaagaaatcataaatcggataacgaatgcactt
gatttaaaagaacatcttcagaaaactgtaaagaaactacctgcaggaatcaagcgaaag
ttgtgttttgccctgagtatgctggggaaccctcccattactctgctagatgaaccatct
acgggtatggaccctaaagccaaacagcacatgtggcgagcaattcgaactgcatttaaa
aacaaaaagcgggctgctattctgaccactcattatatggaggaagcagaggctgtctgt
gaccgagtggctatcatggtatctgggcagttacggtgtattgggaccgtccagcatctg
aagagtaaatttggaaaaggctactttttggaaattaagttaaaggaatgggtggaaaac
ctagaagtagaccgccttcaaagagaaattcagtatattttcccaaatgcaagccgtcag
gagagtttttcttctattttggcttataagattcctaaggaagatgttccatcccttgca
cagtctttttctaagctggaagaagctaaacatacttttgccattgaagaatatagcttt
tctcaagcaacactggaacaggtttttgtagaactcactaaagaacaagaggaagaagat
aatagttgtggaactttaaacagcacactgtggtgggaaagaacacaggaagacagagta
gtattttga
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integrated database retrieval system
