Prionailurus viverrinus (fishing cat): 125151615
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Entry
125151615 CDS
T09889
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pviv03021
]
125151615 (SUPT6H)
03036 Chromosome and associated proteins [BR:
pviv03036
]
125151615 (SUPT6H)
Transcription machinery [BR:
pviv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
125151615 (SUPT6H)
Chromosome and associated proteins [BR:
pviv03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
125151615 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
125151615
NCBI-ProteinID:
XP_047688834
LinkDB
All DBs
Position
E1:complement(17922526..17955425)
Genome browser
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNDEGEVVPRVTKKFVEEEDDDEEEEEENLDDQDEQGNLKGFIND
DDDEDEGEEDEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
VKKMSDDEDDDEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAVEAPMAPPEEEEEDDEESD
IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEY
EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
RSIPVKGAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQPTSSFSRKGPSTIQKIK
EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
AAKASRKKLKRVREEGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKICLAE
DEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
LYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
LNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYC
EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQ
QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQH
VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
YSYTTPSQPITTPQYHQLQASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggaaagcgaggccgaggagtcagaggaagagtacaatgatgaaggc
gaagtggtgccccgagtcaccaagaaatttgtggaggaggaggatgacgatgaggaggag
gaggaggagaacctagatgatcaggatgagcaaggcaatctgaaaggctttatcaatgat
gatgacgatgaagatgaaggggaggaggatgagggtagtgactctggtgattcagaagat
gatgttggccacaagaagagaaaacgcacatcttttgacgaccgcctggaggatgatgat
tttgacctcattgaggagaatttgggtgtcaaagtcaaaagaggacaaaaataccgacgt
gtcaaaaaaatgtcagatgacgaggatgacgacgaggaggaatatggcaaagaggaacat
gaaaaagaggctattgccgaggaaatcttccaggatggggaaggagaagaagggcaggag
gctgtggaggcccccatggctcctccagaggaggaggaagaagatgatgaggaatcagac
atcgatgacttcattgtggatgatgacggacagcctctgaaaaaacctaagtggcggaaa
aagcttcctggatacacagatgcggccctgcaggaagcccaggagatttttggtgtggac
tttgactatgacgagtttgagaaatacaatgagtatgacgaagaactggaggaagagtat
gagtatgaggatgatgaggccgagggtgagatccgagtgcgccccaagaagaccaccaag
aaacgtgtgagccgcaggagcatctttgagatgtatgagcccagcgagctagaaagcagc
cacctcacagatcaggacaatgaaatccgagccactgacctgcctgagaggttccagctc
cgctccatcccagttaagggggctgaagatgacgaactagaagaagaagctgactggatc
tacaggaatgcctttgccacaccaaccatttctcttcaggaaagctgtgattacctagac
cgagggcagccaaccagcagcttcagtcgtaaagggcccagcacaattcagaagattaaa
gaagccctgggtttcatgcgaaatcaacactttgaggtgccttttattgctttctaccgt
aaggagtatgtggagcctgagttgcacatcaatgacctatggagggtgtggcagtgggat
gaaaagtggacccaactgaggatccgcaaagagaacctaacacggctgtttgagaagatg
caagcttatcagtacgagcagatctctgctgatcctgacaaacccctggctgatggcatc
cgggctctagataccaccgacatggagaggcttaaggatgtccagtcaatggatgagctg
aaagatgtctacaaccatttcttgctatattatggtcgtgatatccccaagatgcagaat
gctgccaaagccagccgcaagaagctgaagcgtgtgagggaagagggagatgaggaaggt
gagggtgaagaggcagaagacgaggagcagaggggcccagagctcaagcaggcctcccgc
cgagacatgtacaccatttgccagagcgctggcctagatggcctggccaaaaagtttgga
ctgactcctgaacaatttggggaaaacctgcgggacagctaccagcggcacgagacagag
cagttccctgcagagcctttggagctggccaaggattatgtttgcagccagttccctaca
cctgaagctgtgctggaaggtgcccgctacatggtagccctgcagattgcccgagagccc
ctcgtccgacaggtgctgaggcagaccttccaggagagagccaagctcaatataaccccc
accaagaaaggtagaaaggatgtggatgaggcccactacgcttactccttcaagtactta
aagaacaagcctgttaaggaactgagagatgaccagttcctcaagatctgcttggctgaa
gatgaagggctgctcaccattgacatcagcatagatatgaagggggtagaaggctacggc
aatgaccagacatatttcgaagagatcaaacagttttactaccgagatgagttcagccac
caggtgcaggagtggaaccggcagcgcaccatggccatcgagcgagccttgcagcagttc
ctctacgtgcagatggccaaagagctcaagaacaagctgctggccgaagccaaagaatat
gtcataaaggcctgtagtcggaaactctacaactggttgagggtggcaccctaccggcca
gatcaacaggtagaggaagatgatgactttatggatgagaaccaagggaagggcatccgc
gtcctaggcattgctttctcctctgccagagatcaccccgtgttctgcgccctggtcaac
ggtgaaggagaagtgacagacttccttcgactgccccattttaccaaacggcgaactgca
tggagagaggaagaacgggaaaagaaggctcaagacattgaaaccctaaagaaatttctt
ctgaataaaaagcctcatgtggtgacagttgcaggagaaaacagggacgcccagatgttg
attgaagatgtgaagcgcattgtgcatgagctggaccagggccaacaactgtcctctatt
ggggtggagctggttgacaatgagttggccattctctacatgaatagcaagaaatcggag
gcagagttccgggattatcctccagtgctgagacaggccgtctccctggcccggcgcatc
caggaccctctgattgaatttgcccaggtgtgcagctctgatgaagacatcctgtgtctc
aagtttcatcccttgcaagagcatgtggtgaaagaggagctgctcaatgccttatactgt
gaatttatcaaccgagtcaatgaggttggggtcgatgtcaaccgtgccatcgcccaccca
tatagccaggccttaatccagtacgtctgtggtctgggacctcgaaaagggacccatctc
ctgaagatcctgaagcagaacaacaccaggctggagagtcggacccagctggtcaccatg
tgccacatgggtcccaaagtcttcatgaattgtgctggcttcctcaagatcgacacggcc
tccctgggggacagcaccgactcatacattgaagttcttgacggttcccgagtccaccct
gagacctatgagtgggccaggaagatggcagtggatgctctggaatatgatgaatcagct
gaggacgctaaccccgcaggagccctcgaagagatcttggaaaacccagagcgactgaag
gatctggaccttgatgcctttgcagaagaactggagaggcagggctatggtgacaaacac
atcaccctgtatgacatccgggcggagctgagctgtcggtataaggacctccggacagcc
taccgctctcccaacacagaggaaatcttcaatatgttaaccaaagaaacaccagagacc
ttctacattggaaagctcatcatctgcaacgtcactggcattgcccacaggcgtccacag
ggtgagagctatgaccaggcgatccgcaacgatgagacagggctgtggcagtgccccttc
tgtcagcaagacaatttccctgaactgagcgaggtctggaaccactttgacagcggttca
tgcccaggccaggccattggtgtcaaaacacggctagacaatggtgtcaccggcttcatc
cccaccaagttcctcagtgacaaagtggtaaagcggcccgaggagcgagtgaaggtggga
atgaccgttcactgccgcatcatgaagattgacattgagaagttcagcgcagaccttacc
tgccgaacctcagacctcatggacaggaacaacgagtggaaactgcccaaggacacgtac
tatgactttgacgctgaagcagcagaccacaagcaggaggaggacatgaaacggaagcag
cagcggaccacatacatcaagcgagtgatcgcacacccatccttccataatataaatttc
aagcaagcagaaaagatgatggagaccatggaccagggtgatgtgatcatccgaccaagc
agcaagggtgagaatcacctgacagtgacctggaaggtcagtgatggcatctaccagcac
gtggacgtgcgggaagagggcaaggaaaatgccttcagcctgggagccaccctgtggatc
aatagtgaggaatttgaagacttggatgagattgttgctcgctatgtccagcccatggca
tcctttgcccgggaccttctgaatcacaagtattatcaggactgcagtggtggggatcgt
aagaaattagaggagctgctcatcaaaactaagaaggagaagcccaccttcatcccttat
ttcatctgtgcctgcaaggaactgcccggcaagttcctactgggataccagccccggggt
aaacccaggatagaatacgtaacagtgactccagaaggattccggtaccggggccaaatc
ttccctactgtgaacggacttttccgatggtttaaggatcactaccaggatcctgtacca
ggcatcactcccagtagcagcagtaggacccggacacctgcttctatcaatgccacccca
gccaatatcaaccttgcagatctgacacgggctgtgaatgccctgcctcagaacatgacc
tcgcagatgttcagtgccatcgcagccgtgacaggccaaggacagaaccccaacgccaca
ccagcccagtgggcctcgagccagtatggctatggcggcagtggagggggcagcagcgct
taccacgtgttcccaacgccagcccagcagccagtggccacaccactaatgacccccagc
tactcctacacaaccccaagccagcccatcaccacaccacagtaccaccagctacaggcc
agcaccaccccacagtctgcccaggcccagccccagccctcctccagctctcggcaacgg
cagcagcagccaaagtccaacagccatgcagccatcgactgggggaagatggcagagcag
tggctacaggagaaggaggcggagcggcggaaacagaagcagaggctaacacctcggccc
tctcccagccccatgatcgaaagcacccccatgtccattgctggcgatgccaccccgctc
ctggacgagatggaccggtag
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integrated database retrieval system
