Prionailurus viverrinus (fishing cat): 125151632
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Entry
125151632 CDS
T09889
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03013
Nucleocytoplasmic transport
pviv03015
mRNA surveillance pathway
pviv03040
Spliceosome
pviv05014
Amyotrophic lateral sclerosis
pviv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125151632 (ALYREF)
09122 Translation
03013 Nucleocytoplasmic transport
125151632 (ALYREF)
03015 mRNA surveillance pathway
125151632 (ALYREF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125151632 (ALYREF)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125151632 (ALYREF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pviv03019
]
125151632 (ALYREF)
03041 Spliceosome [BR:
pviv03041
]
125151632 (ALYREF)
Messenger RNA biogenesis [BR:
pviv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125151632 (ALYREF)
TREX complex
125151632 (ALYREF)
Spliceosome [BR:
pviv03041
]
Complex C
Other components
EJC/TREX
125151632 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
125151632 (ALYREF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
125151632
NCBI-ProteinID:
XP_047688869
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All DBs
Position
E1:complement(52136744..52140677)
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AA seq
257 aa
AA seq
DB search
MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQAAARVNRGGGPIRNRPA
IARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDA
DIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL
VTSQIDTQRRPAQSVNRGGMTRNRGSGGFGGGGGTRRGARGGSRGRGRGTGRSSKQQLSA
EELDAQLDAYNARMDTS
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaaatggacatgtctctggacgacatcattaagctgaaccggagccagcga
ggcggccgcggcggaggccggggccgcggcagggccggctcccagggcggccgcggcggc
ggggcgcaggccgccgcgcgagtgaaccgaggcggcgggcccatccggaaccggccggcc
atcgctcgaggcgcggcgggcggcggcggcaggaaccggccggcgccctacagcaggccg
aaacaacttcccgacaagtggcaacacgaccttttcgacagcggtttcgggggcggcgca
ggcgtcgagacgggtgggaaactgctggtgtcaaatctggattttggagtatcggacgcc
gatattcaggagctcttcgctgagttcggaactctgaagaaggcggccgtacactacgat
cgctcagggcgcagtttaggaacagccgacgtgcactttgaacggaaggcagatgccctg
aaagcgatgaagcagtacaacggcgtccccctggatggccgccccatgaacattcagctc
gtcacgtcacagattgacacacagcggagacccgcacagagcgtaaacagaggcgggatg
accagaaaccgcggttccggaggcttcgggggcggtggcggcacccggagaggcgctcgc
ggaggaagccggggcaggggcagaggcaccggcaggagttcgaagcagcagctctccgcc
gaggagttggacgcccagctggacgcttataacgccagaatggacaccagttaa
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