Prionailurus viverrinus (fishing cat): 125151739
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Entry
125151739 CDS
T09889
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03040
Spliceosome
pviv05202
Transcriptional misregulation in cancer
pviv05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125151739 (DDX5)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
125151739 (DDX5)
05205 Proteoglycans in cancer
125151739 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pviv03041
]
125151739 (DDX5)
03009 Ribosome biogenesis [BR:
pviv03009
]
125151739 (DDX5)
Enzymes [BR:
pviv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125151739 (DDX5)
Spliceosome [BR:
pviv03041
]
Complex A
U1 snRNP components
U1 related factors
125151739 (DDX5)
Complex B
125151739 (DDX5)
Ribosome biogenesis [BR:
pviv03009
]
Eukaryotic type
Pre-60S particles
Helicases
125151739 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
ERCC3_RAD25_C
Cas3-like_C_2
BNIP2
Motif
Other DBs
NCBI-GeneID:
125151739
NCBI-ProteinID:
XP_047689099
LinkDB
All DBs
Position
E1:complement(38577501..38584524)
Genome browser
AA seq
660 aa
AA seq
DB search
MWRREKCETKGEAPPQRERRPVRDSSPGSCQLLLLFFFALYNFAIRIRSPSAGYPQFDWL
AFGAPRFGGSRAGPLSGKKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVE
TYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDM
VGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRAC
RLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRML
DMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNIL
QIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGD
KSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTAR
STKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGSGRSRGRGGMKDDRR
DRYSAGKRGGFNTFRDRENYDRGYSSLLKRDFGAKTQNGVYSAANYTNGSFGSNFVSAGI
QTSFRTGNPTGTYQNGYDSTQQYGSNVPNMHNGMNQQAYAYPATAAAPMIGYPMPTGYSQ
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgcagagagaaatgcgagacaaagggggaagcgccgccccagcgggaacgccgc
ccggtccgggactcctcccccggtagttgccagctcctcctcctctttttctttgcgtta
tataattttgctatcagaatcaggagcccttccgcgggatacccccaattcgattggctt
gcgtttggtgcacctcgatttgggggaagtagggcagggcccctatctggaaagaagttt
ggaaaccctggggaaaaactagtcaaaaagaagtggaatcttgatgagctgcccaaattt
gagaagaatttttatcaagagcaccctgatttggctaggcgcacagcacaagaggtggag
acatacagaaggagtaaggaaattacggttagaggtcacaactgcccaaagccagttctg
aatttttatgaagcgaacttccctgctaacgtaatggatgtcattgcaagacagaatttt
actgagcccactgctattcaagctcagggatggcccgttgctctaagtggattggatatg
gttggagtagcacagactggatccgggaaaacgttgtcttatttgctgcctgctatcgtc
cacatcaatcatcagccattcctagagagaggtgatgggcctatttgcttggtgctggca
ccaactcgggaactggcccaacaagtacagcaagtagctgctgaatactgtagagcatgt
cgcttgaagtccacttgcatctatggtggtgctccaaagggaccacaaattcgtgatttg
gagagaggtgtggaaatctgtattgcaacacctggaagactgattgactttttggagtgt
gggaaaaccaatctgagaagaaccacctaccttgtccttgatgaagcagacagaatgctt
gatatgggctttgaaccccaaataaggaagattgtggatcagataagacctgataggcaa
accctaatgtggagtgcaacttggccaaaagaagtaagacagcttgctgaagatttcctg
aaagactacattcacataaacattggtgcactagaactgagtgcaaaccacaatattctt
cagattgtggatgtatgtcatgatgtagaaaaggatgaaaaacttattcgtctaatggaa
gagatcatgagtgagaaggagaataaaaccattgtttttgtcgaaaccaaaagaagatgt
gatgagcttactagaaaaatgaggagagacgggtggcccgccatgggtatccatggtgac
aagagtcaacaggaacgtgactgggttctaaatgaattcaaacatggaaaagctcctatt
ctgattgctacagatgtggcctccagagggctagatgtggaagatgtgaaatttgtcatc
aattatgactaccctaactcctcagaggattatattcatcgaattggaagaactgctcgc
agtaccaaaacaggcacagcatacactttctttacacctaataacataaagcaagtgagc
gaccttatctctgtgcttcgtgaagctaatcaagcaattaatcccaagttgcttcagttg
gtcgaagacagaggttcaggtcgttccaggggtagaggaggcatgaaggatgaccgtcgg
gacagatactctgcgggcaaaaggggtggatttaatacctttagagacagggaaaattat
gaccgaggttattctagtctgcttaagagagattttggggcaaaaactcagaatggtgtt
tacagtgctgcaaattacaccaatgggagctttggaagtaattttgtgtctgctggtata
cagaccagttttaggactggtaatccaacagggacttaccagaacggttatgatagcact
cagcaatatggaagtaacgttccaaatatgcacaatggtatgaaccaacaggcatatgca
tatcctgctactgcagctgcacctatgattggttatccaatgccaacaggatattctcaa
taa
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