Prionailurus viverrinus (fishing cat): 125151854
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Entry
125151854 CDS
T09889
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03030
DNA replication
pviv03420
Nucleotide excision repair
pviv03430
Mismatch repair
pviv03440
Homologous recombination
pviv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125151854 (RPA1)
03420 Nucleotide excision repair
125151854 (RPA1)
03430 Mismatch repair
125151854 (RPA1)
03440 Homologous recombination
125151854 (RPA1)
03460 Fanconi anemia pathway
125151854 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pviv03000
]
125151854 (RPA1)
03032 DNA replication proteins [BR:
pviv03032
]
125151854 (RPA1)
03400 DNA repair and recombination proteins [BR:
pviv03400
]
125151854 (RPA1)
Transcription factors [BR:
pviv03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
125151854 (RPA1)
DNA replication proteins [BR:
pviv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
125151854 (RPA1)
DNA repair and recombination proteins [BR:
pviv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
125151854 (RPA1)
MMR (mismatch excision repair)
125151854 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
125151854 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
125151854
NCBI-ProteinID:
XP_047689291
LinkDB
All DBs
Position
E1:complement(14792518..14865883)
Genome browser
AA seq
618 aa
AA seq
DB search
MVGHLSEGAIAAIMQQGDTSIKPVLQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNHLVEGEQLSSNCICQINRFIVNTLKDGRRVIILMELDILKSAEAVGLKIGNPVPYNE
GHGQQQVVPSLASAANPPASKPQQQNGSSGIGSTASKTYGASKTFGKAGATNLANTGSGG
TQVKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESGEIRATAFN
EQVDKFFPLIDMNKVYYISKGTLKIANKQFTAVKNDYEMTFNNETSVVPCEDGHHLPTVQ
FDFTAIGDLENKSKDSLIDIIGICKSYEDATKITVKSNNREVSKRDIYLMDMSGKVVTAT
LWGEDADRFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRGWFDSEG
QALDGVSISDLKSGGTGGSNTNWKTLYEVKSENLGHGDKADYFSCVATVVFLRKENCMYQ
ACPAQDCFKKVIDQQNGLYRCEKCDSEFPSFKYRMILSANIADFQENQWVTCFQESAEAI
IGQTTAYIGELKEKNEQAFEEVFQNANFRTFIFKIRVKLETYNDESRIKATVMDVKPVDY
REYGKRLIMNIKRNALMM
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggtgggccacctgagcgagggggccattgcggccataatgcaacagggagacacttcc
ataaaacctgtcctccaggtcattaacatccgtcccatcactacagggaatagtccaccc
cgttatcgactgcttatgagtgatggattgaacactctctcctctttcatgttggcaaca
cagttgaaccatctcgttgagggagaacaattgtctagcaactgtatttgccagattaac
cgatttattgttaacactctgaaagatggaaggagagtaattattttgatggagttagac
attttgaaatcagctgaagcagttggattaaagattggcaatcctgtgccctataatgaa
ggacacgggcagcagcaggtagttccttctctggcctcagcagccaacccgccagccagc
aagccccagcaacagaatgggagctcggggataggttccactgcatctaagacttatggt
gcttcaaagacatttggaaaagctggagctaccaacctagcgaacacaggttctggagga
acacaggtcaaagtggtacccattgccagcctcaccccttaccaatccaagtggactatc
tgtgctcgagttaccaacaaaagtcagatccgtacctggagtaattcccggggggaaggg
aagctcttctccctagaactagttgatgaaagtggtgaaatcagagctactgctttcaac
gagcaagtggacaagttttttccccttattgacatgaacaaggtctattacatctctaaa
ggcaccctgaagattgctaacaaacagttcacagctgttaaaaatgactatgagatgacc
ttcaataatgagacttccgtcgtgccctgtgaagatggtcatcatttaccaacagttcag
tttgatttcacagcgattggtgacctggagaataagtctaaagattctctgatagacata
attgggatctgcaagagctatgaagatgccaccaaaatcacagtgaaatctaacaacaga
gaagtttcgaagagagacatctatttgatggacatgtcagggaaagtggtgaccgctact
ctgtggggagaagatgctgatagatttgatggttctagacaacctgtgatggctatcaag
ggagccagagtttctgattttggtggacggagcctctctgtactgtcttcaagcacggtc
attgtgaatcctgacatcccggaggcctataagcttcgtggatggtttgactctgaagga
caagccttagatggtgtttccatctctgatctaaagagtggaggaacaggaggtagcaac
accaactggaaaactctatatgaggttaaatcagagaacctaggccatggtgacaaggcc
gactattttagctgtgtggcgacagttgtgtttcttcgcaaagagaactgtatgtatcaa
gcctgcccagctcaggactgctttaagaaagtgattgatcaacagaatggattgtaccgc
tgtgagaagtgtgatagtgaatttcccagcttcaagtaccgcatgatcctgtcagcaaat
attgctgattttcaagagaatcagtgggtcacctgtttccaggagtctgcggaggccatc
attggacaaaccactgcttatattggggagttaaaagagaagaatgagcaagcatttgag
gaagttttccagaatgccaacttccgaactttcatattcaagatcagggtgaaactagag
acctacaatgatgagtctcgaattaaggccactgtgatggacgtgaagcccgtggactac
agagaatatggcaaaaggctgatcatgaacatcaagagaaacgcactgatgatgtga
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