Prionailurus viverrinus (fishing cat): 125151866
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Entry
125151866 CDS
T09889
Symbol
BRIP1
Name
(RefSeq) LOW QUALITY PROTEIN: Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03440
Homologous recombination
pviv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125151866 (BRIP1)
03460 Fanconi anemia pathway
125151866 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pviv03400
]
125151866 (BRIP1)
Enzymes [BR:
pviv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
125151866 (BRIP1)
DNA repair and recombination proteins [BR:
pviv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
125151866 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
125151866 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
ARCH_RTEL1
Motif
Other DBs
NCBI-GeneID:
125151866
NCBI-ProteinID:
XP_047689311
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All DBs
Position
E1:complement(26145897..26358439)
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AA seq
1233 aa
AA seq
DB search
MMASMWSEYTIGGVKITFPYKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSVALLCS
TLAWQQSFNGKPVDKSLSKKAEEPLSCCCACHSKNFTNIDLKQGTSHHFNCPSTPPSERY
GTSSTCQDSPEKSTLAAKLSAKKQASIKKDENDDFQVEKKRIRPLETTQQIRKRHCFEKE
VRHLDAKVASGKTTILNSPLGKINSFSPQNPPGHCSRCCCSTKQGNSQGCSNTTKKDLGG
KSKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCM
ELLDGKNGKSCYFYHGVHKISDQHTLQTLEGMCKAWDIEELVSLGKKLKACPYYTARELI
EDAHIVFCPYNYLLDAQIRESMDINLKEQIVILDEAHNIEDCARESASYSVTEVQLWFAR
DELDTMVNNNIRKKDHEPLRAVCYSLINWLEANSEHLVERDYESSCKTWSGSEMLLNLHK
MGITTATFPILQGHFSSVLQKEEKVLPIRGREETREVPIISASTQIILKGLFMVFDYLFR
QNSKFADDYKVAIQQTYSWINQTESSDKNEFFAQAKSRKRVRQKTAVRVLNFWCLNPAVA
FSDINGKVWTIVLTSGTLSPMKSFSSELGVTFSIQLEANHVINNSQVWVGTIGSGPKGRN
LCATFQHTETFEFQDEVGALVLSVCQTVSQGILCFLPSYKLLEKLKERWLSTGLWHNLEL
VKTVIVEPPAAEKIDFDELLQMYYDAIKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAV
ITIGIPFPNVKDLQVVLKRQYNDQHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHKNDW
GALILVDDRFSSNPAQYVSGLSKWIRQQVQYHSTFESAMESLAEFSKKHQKVIDVSKEDR
KFIQDSGSTLEVACLKDNTLTYLSEAASHLPPENPREGEAKMCVQELHCPKITTSLSLPG
DIISRKDQDDPILLEESAQTMKAERIVISRSTSPTFNKQTKKVNWSSFNSLGHYITDEIL
TATPKSRSPEDCASSASPFETEKGCKTVLPLTDKCESSSLTVDTSLRAVEPCPQSEIVIS
PIKIDATLLKENYSKQLFYEETLGPDIELSLVSKEAKLSTSNRASDTEAEDESIYFTPEL
YDPEDTNEEKNEQVESDRDNRLANNSKCILAEDLFEIRTEKGVXQEIKAEDCTKLNRLMN
IXSKIDDNGSNLKTTHINELDLGKTRETDTKEY
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgatggcttcaatgtggtctgaatatacaattggtggggtgaaaattacctttccttat
aaagcttacccatcacagcttgctatgatgaattctattgtcagaggattaaatagtaag
caacattgtttactggagagccctacaggaagtgggaaaagtgtagccttactttgttct
actttagcatggcaacaatcttttaatggaaagccagtggacaaaagcttaagtaaaaaa
gctgaggaaccattgtcatgttgttgtgcatgccattcaaagaattttacaaacattgac
ttgaaacaaggaacttcacatcatttcaattgtccaagtacaccaccttctgaaagatat
ggcacttcatcaacttgtcaagactctcctgaaaaatctacgttggctgcaaaactatct
gccaagaaacaggcttccataaaaaaagatgaaaatgatgattttcaagtagagaagaaa
agaattcgacccttagaaactacacagcagataagaaagcgtcattgttttgaaaaggaa
gtgcgtcatttggatgcaaaagttgcttcaggaaagaccacaatactcaactctccatta
ggaaagataaactccttttctccacaaaatccccctggtcactgttccaggtgttgttgt
tctactaaacaaggaaacagtcaaggttgctcaaataccactaagaaggatcttgggggg
aaatccaagatacccaaaatatattttgggacgcgcacacacaagcagattgctcagatt
actagagagctccggagaacagcatactcaggggtcccaatgactattctttccagcagg
gatcacacttgtgtccatccagaagtagtgggcaacttcaacagaaatgaaaagtgcatg
gagttgctggatggaaaaaatggcaaatcctgctatttttatcatggcgtacataaaatt
agtgatcaacacacattacagactctggaagggatgtgcaaagcctgggatatagaagaa
cttgtcagcttgggaaaaaaactaaaggcatgtccgtattacacagcacgggaactaata
gaagatgctcacatagtattttgtccctacaactatcttctagatgcacaaataagggaa
agtatggatatcaatctgaaagaacagattgtcattttggatgaagctcataacattgag
gactgtgctcgggagtcagcaagttacagtgtaacagaagttcaactttggtttgctcga
gatgaattagatactatggtcaacaataatataaggaagaaagaccatgaacccctacga
gctgtgtgctacagcctaattaattggttagaagcaaactctgaacatcttgtggaaagg
gattatgaatcatcctgtaaaacatggagtggaagtgaaatgctcttaaatttacacaaa
atgggtatcaccactgctacttttcccattttgcagggacatttttcttctgtccttcaa
aaagaagaaaaagtcttaccaattcgtggtagagaggagacaagagaagtaccaattatt
agtgcttcaactcagataatactcaaaggactttttatggtgtttgactatctttttagg
caaaacagcaaatttgcagatgattataaagttgctattcagcagacttattcttggata
aatcagactgagtcttcagataaaaatgaattctttgctcaagcaaaaagtaggaaacgt
gtaagacagaaaactgcagttcgcgtgctaaatttttggtgcttaaatccagctgtggcc
ttttcagatattaatggcaaagtttggaccattgttttgacatctgggacattatcacca
atgaaatccttttcatcagaacttggtgttacttttagtatccaactggaggctaatcat
gtcattaataactcacaggtttgggttggcaccattgggtcaggtcccaagggtcggaat
ctctgtgctaccttccagcacacagaaactttcgagtttcaggatgaagtgggcgcactt
gtgttatctgtgtgtcagactgtgagccaaggaattttgtgtttcttgccatcttacaag
ttattagaaaagttaaaagaacgttggctctctactggtttatggcataatctagagttg
gtgaaaacagtcattgtagaaccaccggcagcagaaaaaattgattttgatgaattacta
cagatgtactatgatgcaatcaaatacaaaggagagaaagatggagccctcttggtagca
gtttgtcgtggtaaagtgagtgagggtctggatttctcagatgacaacgcccgtgctgtc
ataacaatagggattccttttccgaatgtgaaagatctacaggttgtactaaagcgacag
tataatgatcagcactccaaactgagaggtcttttacctggtcgtcaatggtatgaaatt
caagcatatagggccttaaaccaggccctaggtaggtgtattcgacacaaaaatgattgg
ggagctcttattcttgtggatgatcgctttagtagtaaccctgcacagtatgtatctgga
ctttctaaatggatacggcagcaggttcagtaccattcaacctttgaaagtgcaatggag
tccttggctgaattttccaaaaagcaccagaaagtcattgatgtatccaaagaggacaga
aagtttatacaggacagtgggtctacacttgaagtggcctgtttgaaggacaatacctta
acttacttatcagaagcagcaagccatctaccaccagaaaatcctagggaaggtgaagca
aaaatgtgtgtccaagaactacactgtcctaaaataaccaccagtctatctctaccagga
gacatcatctcccgaaaggaccaagatgatcctatattattggaagagtctgcccagaca
atgaaagcagaaagaattgtgatttccagatcgacaagcccaaccttcaacaaacagaca
aagaaagttaattggtctagctttaattctttgggacattatattactgatgaaattctg
actgcaacacctaaatccaggtcaccagaggactgtgcctctagcgcttccccttttgaa
acagaaaaaggatgcaaaacagtcttaccactcactgataaatgtgagtcctcatctctg
acggtagacacatcattgagggcagttgaaccatgccctcagtcagaaatcgttatttca
ccaataaagattgatgctactcttcttaaagaaaattattccaaacagctgttctatgaa
gaaaccctgggtccggacattgaattgtctctagttagtaaagaagctaaactttctact
tcaaatagagcttctgacacagaagcagaggatgaatctatctattttacacctgaactt
tatgatcctgaagatacaaatgaagaaaagaatgaacaagttgaaagtgatagagataat
agattggctaataattcaaaatgcattttagctgaagatctttttgaaattagaactgag
aaaggagtcnnccaagaaataaaagctgaggattgcacaaagttgaatagactcatgaat
attnaaagtaaaattgatgacaatggtagtaatttaaaaacaactcatataaatgaatta
gacctgggaaaaactcgtgaaacagatacaaaagaatattaa
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integrated database retrieval system
