Prionailurus viverrinus (fishing cat): 125152007
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Entry
125152007 CDS
T09889
Symbol
TMC6
Name
(RefSeq) LOW QUALITY PROTEIN: transmembrane channel-like protein 6
KO
K21988
transmembrane channel-like protein
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pviv02000
]
125152007 (TMC6)
03037 Cilium and associated proteins [BR:
pviv03037
]
125152007 (TMC6)
Transporters [BR:
pviv02000
]
Other transporters
Pores ion channels [TC:
1
]
125152007 (TMC6)
Cilium and associated proteins [BR:
pviv03037
]
Other cilia and associated proteins
Stereociliary proteins
125152007 (TMC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
125152007
NCBI-ProteinID:
XP_047689623
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All DBs
Position
E1:complement(49367931..49385370)
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AA seq
807 aa
AA seq
DB search
MAQPLPFVLNVPELPEDHDREPSPFDESEVHDSFHQLIQEQSQCVAEEGLELRQRGLGAA
APGTSGSGRQALVGPEDAAAHSTATLRILASMPSRTIGRSRGAIISQYYNRTVRLRRRVS
RPQLGGVGRSARPSLRLYDLELDPAALEEEEKRSLLVKELQSLTVAQRGHMLKGMPLGLA
EKRSLREESRTLTGKHREQRGRRGLLACCGWLRDTCVLALHGLGLWLLAGLHGLKPWRYA
LKQIGGQFGSSVLSYFLFLKTLLAFNALLLLPVLAFVVGVQAAFPPPASPGPVPAFTGLE
LLTGGGRLTHTVMYYGYYGNSTLNPPCGPAPDGGQCGRETDGLPYNMPLAYLFTVGGAFF
ITCITLVYSMSHSFGESYRVGSTSGVHAITVFCSWDHKVTQRRASRLQHDNIRTHLKELL
AEGQLRQGPRSVCGRLRQVAVLGLVWLLCLAITLGCTVAVYAFSELMIQSPVSAEQGGAL
LALPVVVCLLNLGAPYLYRGLAALERHDSPVLQVYVAVCRNLILKMVILGILCYHWLGRR
VGTLRDQCWENFVGQELYRLMVLDFIFILLDTLFGELVWRLISERKLKRKEKPEFDIAGN
VLELIYGQTLTWLGVLFAPLLPAVQIIKLVFLFYVKKTSLMANCQAPRRPWLASHMSTVF
ISLLCLPSFLGAAVFLCYAVWQVKPSSTCGPFRTLDTMYEAGKVWVRRLEKAGPRVSWLP
WVHRYLVENTFPVYLVSALLLAVIYLNIQVVKGQRKVICLLREQISNEGEDKIFLINKLH
SVYEKKERSRGGRTQEAERLEEDPDAR
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggcccagccgctgccctttgtcctcaatgtccctgagctcccggaggaccatgaccgg
gagcccagcccgttcgacgagagtgaagtccatgactccttccaccagctcatccaggag
cagagccagtgcgtggctgaggagggactggagttacggcagagggggctgggggccgca
gccccggggacctcgggcagtggccgccaggccctcgtggggcccgaggatgctgctgcc
cacagcacggccacgctccgcatcctggccagcatgcctagtcgcaccatcggccgcagc
cgcggggccatcatctcccagtactacaaccgcacggtgcggcttcggcgcagggtcagc
cggccccagctcgggggcgtggggcgctcggcccggcccagcctccgcctctatgacctg
gagctggaccccgcggccctcgaggaggaggagaagcggtccctgctggtgaaggagctc
cagagcctgacggtggcccagcggggccacatgctgaagggaatgcccttgggcctggcc
gagaaacgcagcctgcgagaggagagccggaccctgacggggaagcacagggagcagcgg
ggccggcgtgggctcctcgcctgctgcggttggctccgagacacctgcgtcctggccctg
cacggcctggggctctggctgctggcgggtctgcacggcctgaagccctggcgctacgcc
ctgaagcagatcggaggccagttcggctccagcgtgctctcctacttcctcttcctcaag
accctgctggccttcaacgccctcctgctgctgcccgtgctggcctttgtcgtgggcgtg
caggccgccttcccgccaccagcctccccgggccccgtccccgccttcacgggcctggag
ctgctcacgggcgggggccgtctcacccacaccgtcatgtactacggctactatggcaac
agcacgctgaacccgccgtgcgggcccgccccggacggcggtcagtgtggccgcgagacc
gacggcctgccctacaacatgcccctggcctacctcttcactgtgggcggagccttcttt
atcacctgcatcaccctggtgtacagcatgtcacactcttttggggagagctaccgggtg
ggcagcacctcgggggttcatgccatcaccgtgttctgctcctgggaccacaaggtgact
cagagacgggcctcccgcctccagcacgacaacatccgaacccatctgaaggagctgctg
gccgaggggcagctgcggcagggtccccggagcgtgtgcgggcggctgaggcaggtggcg
gtgctgggcctcgtgtggctgctgtgcctggcgatcacgctgggctgcaccgtggccgtc
tacgccttctccgagctcatgatccagagccccgtgtctgctgagcaggggggggcgctg
ctggccctgccggtggtggtctgcctcctcaacctgggggccccctacctgtaccgcggc
ctggcggccctggagcgacacgactccccagtgctgcaggtgtacgtggccgtctgcagg
aacctcatcctcaagatggtcatcctgggaattctttgctaccactggctgggccgcagg
gtgggcaccctgagggaccagtgctgggagaactttgtgggccaggagctgtaccggcta
atggtgctggatttcatctttatactgctggacacgcttttcggggagctggtgtggagg
ctcatctccgagaggaagcttaagaggaaggagaagccggagtttgacattgccgggaat
gttctggagctgatttacgggcagaccctgacctggctgggggtcctctttgctcccctc
ctccctgccgtccagatcatcaagctggtgttcctcttctacgtcaagaagacgagcctg
atggccaactgccaggcgccccgcaggccctggctggcctcccacatgagcaccgtcttc
atctcgctgctctgcctcccgtccttcctgggagccgccgtcttcctctgctacgccgtg
tggcaggtgaagccctccagcacctgcggccccttccggaccctggacaccatgtacgag
gcgggcaaggtgtgggtgcggcgcctggagaaggcgggccctagggtctcctggctgccc
tgggtccaccggtacctggtggaaaacaccttccccgtctacctggtgtcggccctgctg
ctggctgtgatctacctcaacatccaggtggtgaagggccagcggaaggtcatctgcctc
ctccgggagcagatcagcaatgagggggaagacaaaatcttcttgatcaacaagcttcac
tctgtctacgagaagaaggagaggagcaggggtggtagaacccaggaggccgagaggctc
gaggaggatccggacgcccgctag
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