Prionailurus viverrinus (fishing cat): 125152383
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Entry
125152383 CDS
T09889
Symbol
DHX34
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34 isoform X1
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pviv03019
]
125152383 (DHX34)
Enzymes [BR:
pviv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125152383 (DHX34)
Messenger RNA biogenesis [BR:
pviv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
125152383 (DHX34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_DHX34
HA2_C
Helicase_C
OB_NTP_bind
DEAD
HA2_N
AAA_22
nSTAND3
AAA_19
AAA_16
ResIII
ATPase_2
TsaE
Motif
Other DBs
NCBI-GeneID:
125152383
NCBI-ProteinID:
XP_047690141
LinkDB
All DBs
Position
E2:52850008..52887766
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AA seq
1141 aa
AA seq
DB search
MPPPRTKEGGDDRGRHWDPSEEDAPEKWDWNCPETRRLFEDAFFRDEDYIPQGSEERKKF
WTFFERLQRFQNLKSTRKGDKDPGCPKHSIPALADLPRAYDPRYRISLSVRGPDARGSRG
LDRQPPERVSEFRRALLHYLDFGQKQAFGRLARLQRERAALPIAQYGTRILQTLKEHQVV
VVAGDTGCGKSTQVPQYLLAAGFSHVACTQPRRIACISLAKRVSFESLSQYGSRVGYQIR
FESTRTAATKIVFLTVGLLLRQIQREPRLPQYQVLIVDEVHERHLHNDFLLGVLRRLLPE
RPDLKVILMSATINISLFSSYFGGAPVVQVPGRLFPITVVYQPQEAEPPASKSEKLDPRP
FLRVLEAIDNKYPPEERGDLLVFLSGMAEISVVLEAAQAYASRTQRWVVLPLHSALSVAD
QDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLQRLQEFWIS
QASAEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMCVGDPR
TFPFIEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHL
AEPVLTIAAALSVQSPFTRSAQSNPEGAAARRPLDSDHGDPFTLFNVFNTWVQVKSERSR
SSRKWCRHRCIEEHRLYEMANVRRQFKELLEDHGLLARARAPKPGDGYSRLRQRRERRAL
YQLKRRHEEGGGHRRKVLRLQEDPGGCSSEEDPGAGDSVDIQDVKFKLRHSLDQLQAATT
SAQDLTRDQVALLKLVLGRGLYPQLAVPDPFNSSRKDSDQIFHTQSKQGTVPHPTSVFAS
SPEVLHTQEQEAGGGEGSRDDKDKLSSRHQLLAFVSLLETNKAYLVNCVRIPALQSLLLF
SRSLDTNGDCSRLVADGWLELQLADSESAVRLLAASVRLRARWESALDRQLARQAQQRRP
EVDQEEEEEEDPVARKEVADLSRELLKFTASKVPYSLRRLTGLEVQNLYVGPQTITAMPS
LPGLFGSSALSPHPTKGGYAVTDFLTYNCLTSDTDLYSDCLRTFWTCPHCGLHVPLTPLE
RIAHENTCPEAPQDGPPGAEEAAPEPLQKASVLQKPYHCAVCQKDFLFTPTEVLRHRRQH
V
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcccagaacgaaggagggcggggatgaccgaggccgacactgggatcccagt
gaggaggacgcccctgagaaatgggactggaattgtccggagacccgtcgcctctttgag
gacgcctttttccgtgatgaggattatataccccagggttctgaggagcgcaagaagttc
tggaccttctttgaacgcttacagagattccagaacctcaagagcaccaggaagggggac
aaagaccctgggtgtcccaagcacagcatcccggcgctggccgacctgcctcgcgcttac
gacccccgttaccgcatcagcctctcggtccggggccccgacgcccggggctctcggggg
ctggacagacagcccccggagagggtgtccgagttccgccgagcccttctgcactacctg
gactttggccagaagcaggcgtttggacgactggccagactgcagagggaacgggcggcc
ctccccatcgcccagtacgggacccgcatcctgcagacactgaaggaacaccaggtggtg
gtggtggcgggtgacacgggctgtggcaagtccacccaggtgccccagtacctgctggcc
gccggcttcagtcacgtggcatgcacccagccccggcgtatcgcctgcatctccctggcc
aagcgcgtcagcttcgagagcctcagtcagtatggctcacgggtcggctaccagatccgc
tttgagagcacacggacggcagccaccaagatcgtgttcctgacggtggggctgctcctg
aggcagatccagcgggagccccgcctgccccagtaccaggtcctgatcgtggacgaagtc
cacgaacgccacctgcacaacgacttcctgctgggcgttctccggcgcctgctgcctgag
cggcctgacctcaaggtcatcctcatgtcggccaccatcaacatctcgctcttctccagc
tacttcggcggggcccccgtggtgcaggtgcccgggaggctgttccccatcacggtcgtg
taccagccacaggaggccgagccgccggcgtccaagtcggagaagctggaccctcggcct
ttcctgagggtgctggaggccatcgacaataagtacccgccggaggagcggggcgacctc
ctggtcttcctgagcggcatggcggagatcagcgtggtgctcgaggcggcccaggcctat
gccagccgcacccagcgctgggtggttctgccgctgcacagcgccctctccgtggccgac
caggacaaggtgttcgatgtggccccccctggggttcggaaatgcatcctctccaccaac
atcgctgagacctcagtcaccattgatgggatccgcttcgtagtagattctgggaaggtg
aaggagatgggctatgacccacaggccaagttgcagcggctgcaggaattctggatcagc
caggccagtgccgagcagcggaagggccgggcgggccgcacaggccccggcgtctgcttc
cgcctctatgctgaatcggactacgatgccttcgccccctaccccgtcccggagattcgg
agggtggccctcgacgcgctggtgctgcagatgaaaagcatgtgcgtgggggacccgcga
accttccccttcatcgagcctccgccaccagccagcctggaaacggccatcctctacctc
cgggaccagggggccctggacagctcagaggccctcacccctatcggctctctgctggcc
cagcttccggtggacgtggtgatcgggaagatgttgatcctcggttccatgttccacctg
gcggagcccgtgctcaccatcgcagctgccctcagtgtccagtcgccctttacccgcagc
gcccagagcaaccccgagggtgcggccgcgcggaggcccctggacagtgaccacggtgac
cccttcacgctcttcaatgtcttcaacacctgggtgcaggtgaaatccgaacggagcagg
agctcacgcaagtggtgccgccaccggtgcatagaggagcatcggctgtacgagatggcc
aacgtacggcgccagttcaaggagctgctggaggaccacgggctgctggccagggcccgg
gccccgaagccgggggacggctacagccggctgcggcagcgccgggagcgccgggcactg
taccagctgaagcgccggcacgaggagggcgggggacacaggcgcaaggtgctgcggctg
caggaggacccgggcggctgctccagcgaagaggacccgggggccggcgacagcgtggac
atccaggatgtgaagtttaagctgcggcacagcctggatcagctgcaggcggccaccacc
tcggcccaggacctgacgcgggaccaggtggccctgctcaagctggtgctgggccggggc
ctctacccccagcttgcagtcccggacccgttcaacagcagccgcaaggactcggaccag
attttccacacccagtccaagcagggcaccgtgccgcaccccacttccgtctttgccagc
agcccggaggttctgcacacgcaggagcaagaggccgggggcggtgaagggagccgagac
gacaaggacaagctgagcagcaggcaccagctcctcgccttcgtctccctgctggagacc
aacaaggcctacctggtgaactgcgtccgcatccccgcgctccagtctctcttgctgttc
agccggtccctggacaccaacggtgactgctcgcgcctggtggctgacggttggctggag
ctccagcttgcggacagtgagagtgccgtccggcttctggcggcttccgtgcggctccgt
gcccgctgggaaagtgccctggaccggcagctggcgcgtcaggcccagcagcggcggccg
gaggtggaccaagaagaggaggaggaggaggatccggtcgcccgcaaggaggtggccgac
ctgagcagggagctgctgaagttcacggcctccaaggtcccctacagcctccggcggctc
acggggctggaagtccagaacctctatgtgggaccccagaccatcacagccatgcccagt
cttcctggcctctttggtagctctgccttgtcccctcaccccaccaaagggggctacgca
gtcactgacttcctcacctacaactgcctcacgagcgacacggacctgtacagcgactgt
ctccgcaccttctggacctgcccccactgcggcctgcacgtgcccctgacgcccttggag
cgcattgcgcacgagaacacttgccccgaggccccacaggacggtcccccaggggctgag
gaggccgcccccgagcccctccagaaggcgtccgtcctgcagaagccctaccactgcgcg
gtctgccagaaggacttcctgttcacacccacggaggttctgcggcaccggcggcagcac
gtgtga
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