Prionailurus viverrinus (fishing cat): 125152770
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Entry
125152770 CDS
T09889
Symbol
CIC
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
125152770 (CIC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pviv03000
]
125152770 (CIC)
Transcription factors [BR:
pviv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125152770 (CIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
125152770
NCBI-ProteinID:
XP_047691076
LinkDB
All DBs
Position
E2:complement(49509895..49536621)
Genome browser
AA seq
2522 aa
AA seq
DB search
MKPMKKACAGLPGSGSGGKSPPATRAKALRRRGAGEGDKPEEEDDEAQQQQQQPPGPEEA
EEGEEEESERGPGAEGLLPELHPDDSAAPGPAEDPKVEGEASRWEPSLSRKTATFKSRAP
KKKYVEEHGAGSGSIGAAGAPEERARTPEEAGTLGVPPRPPTSTRSSSTDTASEHSADLE
DEPAEACGPGPWPPSGTSGGYDLRQLRSQRVLARRGDGLFLPAVVRQVRRSQDLGVQFPG
DRALTFYEGAPGGGVDVVLDATPPPGALAVGTAVCTCVEPGVAAYREGVVVEVATKPASY
KVRLSPGPNSQPGPPATLPQPPQLPHREPEEAVWVARSSLRLLRPPWEPEALPRKPPAGP
EEEQAEPGGTLPPCPAALDPKQPEDAEVSKISFGGNLGACEEGEEKHPPALGTPALLPLP
PPQLLSPPPKSPAFAGPGRPGEQPSPCQEGSQGGSRSSSVASLEKGAAPAARARTPLTAA
QQKYKKGDVVCTPNGIRKKFNGKQWRRLCSRDGCMKESQRRGYCSRHLSMRTKEMEGLAD
SGPGGAGRPAGVAAREGSTEFDWGDETSRDSEASSVAARGDSRPRLVAPADLSRFEFDEC
EAAVMLVSLGSSRSGTPSFSPVSTQSPFSPAPSPSPSPLFGFRPANFSPINASPVIQRTA
VRSRHLSASTPKAGVLTPPDLGPHPPPPAPRERHSSGILPTFQTNLTFTVPISPGRRKTE
LLPHPGALGAPGAGGGGATPDFPKSDNLDSGVDSVSHTPTPSTPAGFRAVSPAVPFSRSR
QPSPLLLLPPPAGLTSDPGPSVRRVPAVQRDSPVIVRNPDVPLPSKFPGEVGTAGEARAA
GPGRGCRETPVPPGVASGKPGLPPPLPAPVPITVPPAAPTAVAQPMPTFGLASSPFQPVA
FHPSPAALLPVLVPSSYTSHPAPKKEVIMGRPGTVWTNVEPRSVAVFPWHSLVPFLAPSQ
PDPSVQPSEAQQPASHPVASNQSKEPAESAAVAHEQPPGGTGNADPGRPPGATCPESPGP
GPPHTLGVVEPGKGPPPTTEEEAPGPPGEPRLDSETESDHDDAFLSIMSPEIQLPLPPGK
RRTQSLSALPKERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNR
TVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTSLGL
AGGHKETRERSMSETGTAAAPGVSSELLSVAAQTLLSSDTKAPGSGSCGAERLHTVGGPG
SARPRAFSHSGVHSLDGGEVDSQALQELTQMVSGPASYSGTKPSTQYGTPGPFSASGEGG
ALAASGRPSLLPTRASRSQRAASEDMTSDEERMVICEEEGDDDVIADDGFGTTDIDLKCK
ERVTDSESGDSSGEDPEGSKGFGRKVFSPVIRSSFTHCRPSLDPEPPGPPDPPAAFGKGY
GPTPSSSSSSPASSSASAATSFPLGSGTFKAQESGQGSTAGPLRPPLPGAGGPVTPSKAT
RFLSTDPATFRRKRPESVGGLEPPGPSVIAAPPGGGGSVLQTLVLPPNKEEREGSGARMP
SAPAPSLAYGAPAAPLSRPAATMVTNVVRPVSSTPVPIASKPFPTSGRAEASPSDTAGAR
TEPVAGSRAPGSSPLGVSLVYSDKKSAAATSPAPHLVAGPLLGTVGKAPATVTNLLVGTP
GYGAPAPPAVQFIAQGAPGSGAATGSGAGAGSGPNGPVPLGILQPGALGKAGGITQVQYI
LPTLPQQLQVAPAPAPAPGTKAAAPGGPAPTTSIRFTLPPGTSTNGKVLAATAPTPGIPI
LQSVPSAPPPKAQSVSPVQAPPPGGSAQLLPGKVLVPLAAPSMSVRGGGAGQPLPLVSPP
FSVPVQNGAQPPSKIIQLTPVPVSTPSGLVPPLSPATLSGPTSQPQKVLLPSSTRITYVQ
SAGGHALPLGTSPTSSQAGTVTSYGPTSSVALGFTSLGPSGPAFVQPLLSGQAPLLAPGQ
VGVSPVPSPQLPPTCTAPGGPVITAFYPGSPAPTSSAPLAQPSQAPPGLVYTVATSTTPP
AATILPKGPPAPATATPAPTSPFPNATAGSMTYSLVAPKAQRPTPKAPQKVKAAIASIPV
GSFEAGAPGRSGPASRQPLEPGPAREPPVPESELEGQPTTPAPPPPPETWAPTARSSPPP
PPPAEERTGTKGPETMASKFPSSSSDWRVPGLGLESRGEPPTPPSPAPAPAPAPSSSSSS
SEGSSGRAAGDTPERKEAAGTGKKVKVRPPPLKKTFDSVDNRVLSEVDFEERFAELPEFR
PEEVLPSPTLQSLATSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPNT
PKSAKCEGDIFTFDRTGTEAEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFPS
AQATAAFQARYADIFPSKVCLQLKIREVRQKIMQAATPTEQPPGAEAPLPGPPPTGTAAA
PVPTPSPAGGPDPTSPGSDSGTASAAPPLPPPPEPGPGQPGWEGPPQPSPPPPGPSTAAT
GR
NT seq
7569 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaatgaagaaggcatgtgccggcctcccaggttctggcagtggtggcaagtcc
ccaccagccacccgggccaaggccctgagacggcgaggggccggggagggcgacaagcca
gaggaggaagacgatgaggcacagcagcagcagcagcagcctccggggccagaagaggct
gaggagggtgaggaggaggagtctgagcggggccctggggctgaggggctgctcccggag
ctgcatcctgacgactcggcagccccaggcccagccgaggaccccaaggtagagggggag
gcaagccgctgggagccctcgctcagccgtaagacggccacattcaagtctcgagcgccc
aagaagaagtatgtggaggagcatggagctggcagcggtagcattggggcggctggggcc
cctgaagagcgggcacggacccctgaggaggccggcaccctgggtgtacctccacggcca
cccacctccacccgttcctcttccaccgacacggccagcgagcactcagctgatctggag
gatgagccagccgaagcctgtgggccaggtccctggcccccaagtggaaccagtggtgga
tatgacctgcggcagctgaggtcccagcgggtgctggctcggcgtggagatggcctcttc
ctgccggccgtggtgcgccaggtgcgccgaagccaggacctaggggtacagttccctggg
gaccgggccctgacgttctacgagggggcacctggcggcggtgtagatgtggtcttggat
gccacgccgccgccgggcgccctggcggtgggcacggccgtgtgtacctgtgtggagcct
ggtgtggctgcctaccgtgaaggtgtggtggtggaagtggccaccaagccagcttcctac
aaggtccgcctcagccctggccccaactcccagccgggcccaccagccaccctgccacag
cccccacagctgccacaccgtgagcccgaggaggccgtgtgggtggcccgctccagcctc
cgcctgctgcggcccccctgggaacctgaggccctgccgaggaagccccccgcgggcccc
gaggaggagcaggccgagccagggggtaccctgccaccctgccctgctgccctggacccc
aagcagcctgaggatgctgaggtctctaagatcagctttggtggcaacctgggggcttgt
gaggagggcgaggagaagcacccgccagccctgggcactccggccctgctcccactgccc
ccgccccagctcctgtcaccgccacccaagtcaccggcttttgcaggcccaggccgccct
ggggagcagccctcgccctgccaggagggaagccagggcggcagccgtagcagcagcgtg
gcctctctggagaagggggctgcgccagccgcccgggcccgcacaccgttgacagctgcc
cagcagaagtacaagaagggcgacgtggtctgcacacccaacggaatccgcaagaaattc
aatggcaagcagtggcggcggctgtgctctcgagacggctgcatgaaggagtcgcagcgg
cggggctactgctcgcgccacctgtccatgcgaaccaaggagatggagggcctggcggac
agtggcccaggtggggctgggcggccggcaggcgtggcagcacgcgagggcagcaccgag
tttgactggggtgacgaaacatcgcgggacagtgaggccagcagtgtggcggcccgtggg
gactcacgcccacgcctggtggctcctgctgacctgtcacgctttgagttcgatgagtgt
gaggcggctgtgatgcttgtgtccttgggcagctcccgctcgggcacaccctccttctct
ccagtctctacacagtcgcccttctcacctgccccatcaccctccccttcaccgctcttt
ggcttccgccccgccaacttcagccccatcaacgcctcaccggtcatccaacgcactgct
gttcgcagccgccacctaagtgccagcaccccgaaggcaggagtgctgacgccaccagac
ctgggcccccaccccccaccgcccgcccccagagagcgccattcttctggcatcctaccc
accttccagaccaatctgaccttcaccgtgcccatcagccctgggcggaggaagacagag
ctgctgccccacccaggggcactgggggcccctggcgcagggggcggaggagccacccca
gacttccccaagagcgacaacctagactctggtgtggactcggtgtctcacacacctaca
ccctccacaccggctggcttccgggctgtgtcacccgccgtgcccttttcccgctcccgc
cagccctcgccattgctgctgttgcccccacctgccggcctgacctcggatcctgggcct
tctgtgcgcagggttcctgccgtgcagcgggactcacccgtcatcgttcgcaaccccgac
gtgccgctgccctccaaatttccaggggaggtgggcactgctggtgaggctcgggcagcg
ggacctgggcggggttgccgagagaccccagtgccccctggggtggccagtgggaagcct
ggcctgcccccgcctctgccagcccccgtgcccatcaccgtgcctccagccgcgccgact
gctgtggcccaaccgatgcccacctttggcctggcttcttcacccttccagccggtggcc
ttccacccctcacctgctgccctattgcccgtcctggtgcccagcagctacaccagccat
cctgcccccaaaaaggaagtcatcatgggccggcctgggacagtgtggacaaacgtggaa
cctcgctctgttgctgtgttcccctggcactccttagtccccttcctggcccccagccag
cccgacccctctgtgcaaccaagtgaggcccagcaacctgccagccacccagtggcctcc
aaccagagcaaagaacctgctgagtcggcggctgttgctcacgagcagccaccaggtggg
acagggaatgctgatcctgggcggccacctggagccacgtgccctgagagcccagggcct
ggacccccccacactttgggggtggtggaacctggaaagggtccccctcccaccactgag
gaggaggcccctggccctccaggagagccccggctggacagtgagacggagagtgaccat
gatgatgccttcctctccatcatgtctcctgagatccagttgcccctgccacccgggaaa
cgccggacccagtctctcagtgccctgccaaaggaacgagactcctcttcggagaaggat
ggacgcagccccaacaagcgggagaaggaccatattcggcggcccatgaatgccttcatg
atcttcagcaagcggcaccgggccctggtccaccagcgtcaccccaaccaggacaaccgg
accgtcagcaagatcctgggcgagtggtggtacgccctggggcccaaggagaagcagaag
taccatgacctggccttccaggtgaaagaggcccactttaaggctcacccggactggaag
tggtgcaacaaggacaggaagaagtccagctcagaggccaagcccaccagcctggggctg
gcaggagggcacaaagagactcgggagcggagcatgtcagagacggggactgccgctgcc
cctggagtgtcttcggagctcctgtccgttgcagcccagacactcttgagctcggatacc
aaggctccagggagtggctcgtgtggggctgagcgtctgcacacagtggggggacctggc
tcggcccggccccgagccttctcccacagtggggtccacagcctggatggtggggaagta
gatagccaggcgctacaggaactgactcagatggtgtctggccctgcatcctattctggt
acaaagccttccacccaatatgggactccaggccccttctcggcctccggtgagggaggt
gccctggcggccagtgggcgaccctcgctgctgcccacccgggcttcccgttcccagcgt
gccgccagcgaggacatgaccagtgatgaggaacgcatggtcatctgtgaggaggaggga
gatgatgatgtcattgctgacgatggcttcggcaccactgacattgacctcaagtgcaag
gagcgagtgaccgacagcgagagcggagacagttctggggaggacccagaaggcagcaag
ggctttggccggaaggtgttctcgcctgtgattcgttcttcctttacccactgccgccca
tcgctggaccctgagcccccagggcccccggatccacctgcagcctttggcaaaggctat
gggcccaccccatcctcctcctcgtcctcacctgcctcctcctcagcctcagctgccacc
tccttcccactgggctcagggaccttcaaggcccaggagtcaggtcagggcagcacagca
ggcccactgcggcccccactccctggggcagggggcccagtaacaccttccaaggccacc
cggttcctctcaacggatcctgccaccttccggcgcaagagacctgaaagtgtggggggc
ctggagccaccaggcccctcggtcattgcagcacctcctggagggggaggaagtgtcctg
cagacactggtcctgcccccgaataaggaggaacgggaaggcagtggagcccgcatgccc
tcagccccagccccatcactggcctatggggccccagcagcccccctgtcccgcccagct
gccaccatggtcaccaacgtggtgcggcctgtcagtagcactcctgtgcccatcgcctct
aagccctttcccacctctggccgggctgaggcatctccaagtgacacagcaggtgccagg
actgagccagtcgctgggtcccgagcacctgggagctcccctctgggtgtaagcttagtg
tattcggacaagaagtcggcagcagccacctcgccagccccgcatctggtggctgggccc
ctactgggcactgtggggaaggctcctgccacagtcaccaacctgctcgtgggcacacct
ggttatggggccccggcgccccctgctgttcagttcatagcccagggggcccctggcagt
ggggccgctacaggctcaggagcaggtgctgggagtggtcccaatgggccagtgcccctg
ggcatcctgcagccaggtgccttgggcaaagctgggggaatcacccaggtgcagtacatc
ctgcccacgctgccccagcagcttcaggtggctcctgccccggcaccagcccctgggact
aaggcagcagctcctggcggccccgcacccaccaccagcatccgtttcaccctcccgccg
ggcacctcaaccaacggcaaagttctggctgccaccgcacccactcctggcatccccatc
ctgcagtcagtaccctccgccccaccccccaaagcccagtcagtctctcctgtgcaggcc
ccgcccccgggtggctccgcccagctgctacccgggaaggtactggtgcccctggcggcc
cctagcatgtccgtgcggggtggcggggctggccagccactgcccctggtgagcccgcct
ttctcagtacctgtgcagaatggtgcccagccacccagcaagatcatccagctgactcca
gtgcccgtgagcacacccagcggcctggtgccgcccctcagtccagccacgctctccgga
cccacctcgcagcctcagaaggtcctgctgccctcctctaccagaatcacctacgtgcag
tcggcgggtgggcacgcgttgcccctgggcaccagccctacgtccagccaggctggaaca
gtcacctcgtatgggcccacgagctcggtagccctaggcttcacctcactggggcccagc
ggacccgccttcgtgcagcccctgctttcaggccaagccccgctgctggctcccggccag
gtgggcgtgtcacctgtgcccagcccccagctgccgcccacctgcacagcccccggaggt
cctgtcatcacggcgttttaccctggcagccctgcacccacctcctcagcacccctggcc
cagccatcccaggcgcccccgggcctggtctacactgtggctactagcaccaccccacct
gctgccaccatcctgcccaagggcccaccggcccctgccactgccaccccagcccctacc
agtccttttcctaatgccacagcaggctccatgacctacagcttagtggcccctaaggcc
cagcggcctacccccaaggccccccagaaagtgaaggcggccatcgccagcattcctgtg
ggttcctttgaggcaggtgcccctgggcggtcaggccctgcatcccggcagcctttggag
cctggcccagcccgtgagccccctgtccctgagtctgagcttgagggtcagcccacaacg
ccagcccctccaccgcccccagagacctgggctcccacagcccggagcagccccccacca
cccccgcctgctgaggagcggacaggcaccaagggcccggagaccatggccagcaaattc
cccagctcatcttcagactggcgagtccctgggctaggcctggagagccgtggggagcct
cccacccctcccagcccggccccagctccggccccagcccccagtagcagcagcagcagc
agcgagggcagcagtgggagggcagctggggacacccccgagcgcaaggaggcggctggt
accggcaagaaggtgaaggtgcggcccccgcccctgaagaagacctttgactctgtggac
aacagggtcctgtcagaggtggacttcgaagagcgctttgctgagctgcctgagttccgg
cctgaggaggtgctgccttcgcctaccctgcagtctctggccacctccccccgggccatc
ctgggctcctaccgcaagaagaggaagaactccaccgacctggactcggcccccgaggac
cccacctcgcccaagcgcaagatgaggagacgctccagttgcagctcagagcccaacacc
cctaagagtgccaagtgcgagggggacatcttcacctttgaccgtacaggtacggaagcc
gaggatgtgctcggggagctggaatacgagaaggtgccatactcctcactgcggcgcacc
ctggaccagcgccgggccctggtcatgcagctcttccaggaccatggcttcttcccatcg
gcccaggccacggcagccttccaggcacgctacgcagacatcttcccctccaaggtctgt
ctgcagttgaagatccgagaggtgcgccagaagatcatgcaggcggccactcccacggag
cagccccctggagctgaggcccccctccccggaccaccccccactggcactgctgctgcc
cctgtccccactcccagccccgctgggggccccgaccccacctcacctggctcggactct
ggcacagcttcggctgccccgccactgcctccacccccagagccaggtcccggacagcct
ggctgggagggccccccccagccctcccccccaccccctggcccctccacagctgccaca
ggcaggtga
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